Chondrocystis sp. NIES-4102: NIES4102_10370
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Entry
NIES4102_10370 CDS
T05085
Name
(GenBank) putative dihydrouridine synthase TIM-barrel protein nifR3
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_10370
Transfer RNA biogenesis [BR:
chon03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
NIES4102_10370
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
BAZ44033
UniProt:
A0A1Z4RNJ1
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Position
1178249..1179217
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AA seq
322 aa
AA seq
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MNNINHPISIAPMMDRTDRHYRYFMRQISRNTLLYTEMITTQAIIHGDRSKLLDFSPQEK
PLVLQLGGDNPSHLAECAKIGADWGYDAINLNVGCPSPRVQNGNFGACLMTQPELVAKAV
AAMQKAVDIPVTVKHRIGVDQCDRYEDLFDFVRIISEAGCTNFTVHARKAWLQGLSPKEN
RTIPPLRYEDVYRLKQDFPHLFIEINGGITDLLQTKNHLQAVDAVMIGRTAYDRPYLFAT
VDRDIYGEDVTPLLRHQIVTAMLPYIDHWVNRGVRLNSISRHMLQLFADQPGTKAWKRYI
TEHACLPGADAVIISDALAKVR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattaatcatcccataagtattgccccgatgatggatcgaacagatcgtcac
tatcgatatttcatgcgccagatcagccgtaatactttgctgtatacagaaatgattacc
actcaagcaattattcatggcgatcgctctaaacttttagatttctcaccccaagaaaaa
cctttagttttgcaattaggaggagataatcccagtcatttagcagaatgtgccaaaatt
ggggctgattggggatatgatgccataaatttaaatgtaggttgtcctagccctagagtc
caaaatggtaactttggggcttgtttgatgacacaaccagaattagtagcaaaagcagta
gcagcaatgcagaaggcggtggatattcctgtaacagttaaacatcgtattggagttgac
cagtgcgatcgctatgaggatctatttgattttgtacgtattatttctgaagctggctgt
actaattttactgttcacgcccgtaaagcttggctacaaggattaagccccaaggaaaac
cgcactattccccccttgcgctatgaggatgtttatcgtcttaaacaggattttcctcat
ctatttattgaaataaatggcggtataactgatttgctgcaaactaaaaatcatctacaa
gcggtagatgcagtaatgattggacgtactgcttatgatcgtccttatctttttgctact
gtcgatcgcgatatctatggtgaggatgtcacccctcttttacgtcatcaaattgttaca
gctatgctgccatatattgaccattgggttaatcgaggtgtcagacttaattctatcagt
cgtcatatgctccaattatttgctgatcaaccagggacaaaagcttggaagcgttatatt
accgaacacgcctgtttacctggggcagatgctgttattattagtgatgctttggctaag
gttaggtag
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