Chondrocystis sp. NIES-4102: NIES4102_14220
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Entry
NIES4102_14220 CDS
T05085
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NIES4102_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_14220
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES4102_14220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NIES4102_14220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BAZ44413
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Position
1642841..1643686
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AA seq
281 aa
AA seq
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MNEKYKATGIILKGSSLKENDRLVTVLTPEYGLIRAVAPGAKKHKSSLRGRTELFVVNDL
LLVKGRSLDKIIQADTIYTYPGLSRDLGKLAAAQYLGELALFLAVDEQPQKDLYVLFNEH
LKRLEAIDVHKLVYPYLAQAVFHLVAIAGLAPQVFNCCQTQQPVTPELNSSKWQVGFSND
AGGIIDLAKVTANKNDNQPLPEFEQPLPKINYLINPSELAILQQLNHETLPTTESLSTQA
IDIDFDAVWIRIEKILREYIQYHIGKTIYSATLVDSLYVEF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaatataaggctacaggcataattttaaaaggctcttctttaaaggaaaac
gatcgcttagtaacagttttaactccagaatatggcttaattcgggcggtagctcctggg
gcgaaaaagcataaatctagcttaagaggcagaacagagttatttgtcgttaatgattta
ttattagttaaagggcgatcgctcgataaaattattcaggcggatactatctatacctat
ccaggtttgagtcgtgatttgggtaagttggctgctgctcaatatttgggcgagttggct
ttgtttttggcagtggatgaacaacctcaaaaggatttgtatgtattgtttaacgaacat
cttaaaagattagaagcaattgatgttcataagttggtatatccttacttagcccaagca
gtatttcatttagtggcgatcgcagggttagcacctcaagtatttaattgctgtcaaact
caacaaccagttacacctgagcttaatagttctaagtggcaagtgggttttagcaatgat
gctggaggtattattgatttggcaaaagttaccgccaataaaaatgataatcagcctcta
cctgagtttgagcaaccattacccaagataaattatctaatcaaccctagtgaattagca
attctacaacagttaaatcatgagacattaccaacaaccgaatcattatctacccaagca
atagatatagatttcgatgcggtttggatacgaattgaaaaaattctgcgagaatatatt
caataccatattggtaagaccatctattcagctactctagtagatagcctctatgtagag
ttttaa
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