Chondrocystis sp. NIES-4102: NIES4102_16830
Help
Entry
NIES4102_16830 CDS
T05085
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_16830
Transfer RNA biogenesis [BR:
chon03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIES4102_16830
Prokaryotic type
Methyltransferases
NIES4102_16830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
Roc
GTP_EFTU
Ras
AIG1
Motif
Other DBs
NCBI-ProteinID:
BAZ44671
LinkDB
All DBs
Position
1909410..1910786
Genome browser
AA seq
458 aa
AA seq
DB search
MSLVQGETIVAIATAIVPQQGSVGIVRLSGATALEIAKILFDVPGKQQWSSHRILYGYVR
DPSTKQVVDEALLLLMLQPRSYTREDVVEFHCHGGIIAVQEVLQLCVAQGARLAQPGEFT
LRAFLNGRIDLTQAESVSELVAAQSQAASQVALAGLQGKLGSPIRRLRTICLDILAEVEA
RIDFEDDLPPLNEADIQQQLQEVSNEVNLVLATAEQGELLRNGLKVAIVGCPNVGKSSLL
NTWSRSDRAIVTDLPGTTRDVIESSLVVGGIPIQVLDTAGIRETVDTVEKIGVERSLLAA
AAADLVLLTIDAAVGWSEDVEDIYNQVKHQPVILVVNKIDLAPSPSLNYPLEIPQVVYTS
AANNQGIDRLETAILALVGKGEITAANSALAINQRQAAALTRAKVSLEQVQETIINQLPL
DFWTIDLRGAIQALGEITGEEVTESVLDRIFSRFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagttcagggagaaactatagtagcgatcgcaacagcaattgttcctcaacag
gggagtgtgggaatagttcgtttatcaggagcaacggctttagagattgctaaaatttta
tttgatgttccaggtaaacagcaatggtcatctcatcgtattctctatggttatgtgcgt
gatccctcaactaaacaagtggtggatgaggctcttttattattaatgctgcaaccacgc
tcttataccagggaagatgtagtggaatttcattgtcatggtggaattatcgccgtacaa
gaagtgttacagttatgtgttgcccaaggagcaagattagcacaaccaggagaatttacc
cttagagcttttcttaatggcagaatagatttaactcaagccgaaagtgtatcagaatta
gtggctgctcaatctcaagcagcttctcaggtggctttagcaggtttacaaggtaaatta
ggtagtcctattcgtaggttacggacaatctgtttagatattttggcagaagtggaagca
aggattgattttgaggatgatttaccgccactaaatgaagctgatattcagcaacaatta
caagaagtatcaaacgaggtaaatttagttttagcaaccgccgagcagggagaattattg
aggaatgggttaaaagtggcgatcgttggttgtcctaatgtgggtaaatctagtttgttg
aatacttggagtcgaagcgatcgcgcgatcgttacggatttacctggtacaacccgtgat
gtcattgaatctagtttagttgtcggtgggattcctattcaagttttagataccgcaggg
attagggaaacggttgatactgtagaaaaaataggtgtagagcgatcgctcttggctgct
gctgctgctgatttggtgttattaactattgatgctgcggttggctggagtgaggatgtt
gaggatatttataatcaagttaaacatcaaccagtaattttagttgttaataaaatagat
ttagctccctctccctctttaaattatcctttggaaatcccacaggtagtttataccagt
gctgctaataatcaagggatagatcgcttggaaacagctattttggcgttggttggcaaa
ggagaaatcactgctgctaattctgccttggcaattaatcaaagacaagctgctgcttta
actagagctaaagtatctttagagcaagttcaagaaaccattattaatcaattaccctta
gacttttggactattgatctgcgaggtgcaattcaggctttgggagaaattacaggtgag
gaggtaacagaatcagttttagatcgtatttttagtcgtttttgtataggtaagtaa
DBGET
integrated database retrieval system
