Chondrocystis sp. NIES-4102: NIES4102_19440
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Entry
NIES4102_19440 CDS
T05085
Name
(GenBank) tRNA-i(6)A37 modification enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_19440
Enzymes [BR:
chon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NIES4102_19440
Transfer RNA biogenesis [BR:
chon03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NIES4102_19440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAZ44927
UniProt:
A0A1Z4RR40
LinkDB
All DBs
Position
complement(2224505..2225812)
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AA seq
435 aa
AA seq
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MNKADSERMAGVLENMGFEASEDPNLADLILYNTCTIRDNAEQKVYSYLGRQAKRKHQQP
DLTLIVAGCVAQQEGEKLLRRVPELDLVMGPQHANRLEDLLQQVFDGNQVVATEPVHIME
DITKPRRDSNVTAWVNIIYGCNERCSYCVVPNVRGTEQSRTPEAIKAEMEELGRQGYKEI
TLLGQNIDAYGRDLPGSTPEGRHLHTLTDLLYYVHDIPGVDRLRFATSHPRYFTERLIKA
CQELPKVCEHFHIPFQSGDNEVLKAMKRGYTHQKYRRIIQTIREYMPDASITADAIVGFP
GETEEQFENTLKLVEDIEFDLINTAAYSPRPGTPAAVWDNQLSEEIKSDRLQRLNRLVSV
CAEARSNRYLGRVEEILVEEQNVKDPTQVMGRTRGNRLTFFPGDITQLKGKTVKVKITEI
RAFSLTGEVISSDHN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctgattctgagcgtatggctggtgtgttagaaaatatggggtttgaagct
tcagaagatcccaaccttgcagatttaattctctataacacttgtaccattcgagataat
gccgaacaaaaagtttattcatacttaggcagacaagcaaagcgtaaacatcagcaaccc
gatctaactttaattgtggctgggtgtgtggcacaacaagaaggagaaaaactattacgt
cgtgtgcctgaattagacttagtaatgggcccacaacacgctaaccgtctagaggattta
ttgcaacaagtattcgacggtaatcaagtagttgcaaccgaacctgtccatattatggag
gatattactaaacctcgtcgtgatagtaacgtcactgcctgggtaaatatcatttatggt
tgtaatgaacgctgtagttattgtgttgtaccaaatgttcgaggcacagaacaatctcgt
actcccgaagccattaaagcggagatggaagaattaggcagacagggatataaagaaatt
accttactaggacaaaatatagatgcttatggtagagatttacctggaagcactcccgaa
ggcagacatctacacaccctaacggatttactttactatgttcatgatatacctggagtc
gatcgcctgagatttgccaccagtcacccgcgttattttactgaaagactaatcaaagct
tgtcaggaattacctaaagtttgtgaacactttcatataccttttcagtcgggggacaat
gaagtgttaaaagcgatgaaaagaggttatactcaccaaaaatatcgtcgcattattcaa
acaattagggaatatatgcctgatgcttccattactgccgatgctattgtgggttttcca
ggagaaaccgaggaacaatttgagaatacattaaaactagtagaagatattgaatttgat
ttaattaataccgcagcctattcccctcgtcctggcactcctgctgctgtatgggataac
caattaagcgaagaaataaaaagcgatcgcttgcaacgtcttaaccgtttagtatctgtc
tgtgccgaagctcgctctaatcgttatttaggcagagtggaagaaattttagtcgaagag
caaaatgttaaagatcccacgcaagttatgggaaggactagaggtaatcgtttaaccttc
tttcctggggatattacccaattgaaaggtaaaactgtgaaagtaaaaatcaccgagatt
cgcgcttttagtttaacaggggaagtaattagtagtgatcacaattaa
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