Chondrocystis sp. NIES-4102: NIES4102_19510
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Entry
NIES4102_19510 CDS
T05085
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon02024
Quorum sensing
chon03060
Protein export
chon03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NIES4102_19510 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NIES4102_19510 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES4102_19510 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chon02044
]
NIES4102_19510 (ffh)
Enzymes [BR:
chon01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NIES4102_19510 (ffh)
Secretion system [BR:
chon02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NIES4102_19510 (ffh)
Eukaryotic Sec-SRP protein
NIES4102_19510 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
Lamprin
Sporozoite_P67
ArsA_ATPase
AAA_22
cobW
6PF2K
nSTAND3
AAA_33
TPP_enzyme_M
APS_kinase
ParA
Keratin_2_head
AAA_16
AAA_24
KTI12
AAA_31
Motif
Other DBs
NCBI-ProteinID:
BAZ44934
UniProt:
A0A1Z4RR62
LinkDB
All DBs
Position
complement(2233501..2234949)
Genome browser
AA seq
482 aa
AA seq
DB search
MFDALAEKLDEAWKKIRGQNKITKANIQDTLKEVRRALLAADVNLQVVQAFIADVEKKAL
GEGVITGVNPGQQFIKIVYDELVKVMGESNVPLAQADKPPTVILMAGLQGTGKTTATAKL
ALYLRKQQRSCLMVGTDVYRPAAIDQLLTLGKQINVPVFEMGTDANPVDIAKQGIAKGKE
LGVDTVIVDTAGRLQIDEEMMGELSRIKDSINPDEILLVVDAMTGQEAANLTYTFHNQIG
ITGAILTKLDGDSRGGAALSVRQVSGQPIKFVGVGEKVEALEPFYPDRLASRILNMGDIL
TLVEKAQEELDLADVEKMQSKIMEAKFDFNDFVKQMRLLKNMGSLGGVLKLIPGMGKISS
ADLAKGETQLKRTESMINSMTKDEKSNPELLAQSPSRRRRVAKGSGFDEKDVSKLVQDFT
KMRSMMQNMGRGMPGMGMPGMGMPGMGMPGMGMPGMGMPGMGMPGMGGTKKKKKKKKGFG
TL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgctctagcagaaaaattagatgaagcgtggaaaaaaatacgcggtcagaat
aaaataaccaaagccaatatacaagataccctcaaagaagtaagacgtgcgctgttagca
gcagatgttaaccttcaagtagtccaagcttttattgccgatgtagaaaaaaaagcatta
ggagagggagtaattacaggggtaaacccaggtcaacagtttatcaaaatagtctacgat
gaactggttaaagtcatgggagagagtaatgttcctctagcccaagcagacaagccaccc
actgtaatcttgatggctgggttacaaggtacaggaaaaaccaccgccacagccaaatta
gctttatatctgcgtaaacaacagcgttcgtgtttgatggtgggtacagacgtatatcgt
cccgcagcgatcgatcagttactcactttgggtaagcagattaatgtacctgtatttgaa
atgggaacagatgctaacccagtggacatcgccaaacaaggtattgccaagggtaaagaa
ttgggagtagataccgttattgtcgataccgcagggcgactacaaattgacgaagagatg
atgggagaattatcccgcatcaaagatagcattaaccctgatgagatcttgctcgtagtt
gacgctatgacaggtcaagaagcagctaacctaacctatactttccataaccaaattggc
attacaggcgcaattctaaccaagttagacggtgatagtcgtggtggtgcagctttatcc
gtccgacaagtatcaggacaaccgatcaaatttgttggggtgggagaaaaagttgaggct
ttagaacctttctatccagatcgtctagcatcccgtattttaaatatgggcgatatccta
actttagtagaaaaagcccaagaggaattagatttagctgatgtcgaaaagatgcagtct
aaaatcatggaggcaaaatttgactttaacgactttgttaaacaaatgcgcctacttaag
aatatgggatctttagggggagttcttaaattaattcctgggatgggaaaaattagcagt
gcagatttagctaagggagaaacccagttaaaacgtactgagtcgatgattaactccatg
actaaagatgaaaaaagcaatcccgaattactcgcccaatctcctagtcgtcgtcgtcga
gtcgccaagggttcaggatttgatgaaaaagatgtgtctaagttagtccaagactttact
aaaatgcgctcaatgatgcagaatatgggtcgaggaatgcctgggatgggaatgcctggg
atggggatgcctgggatgggaatgcctgggatgggaatgcctgggatgggaatgcctgga
atgggaatgcctggaatgggtggcactaaaaagaaaaagaaaaagaaaaaaggctttgga
acattgtaa
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