Chondrocystis sp. NIES-4102: NIES4102_19870
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Entry
NIES4102_19870 CDS
T05085
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_19870 (sbcD)
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES4102_19870 (sbcD)
Archaeal homologous recombinant proteins
NIES4102_19870 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAZ44970
UniProt:
A0A1Z4RRA1
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Position
2276122..2277357
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AA seq
411 aa
AA seq
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MGTDVMIKILHLSDIHMGSGFSHGRVNPETGINTRLEDFINCLRICIDRAIAEPVDLVLF
AGDAFPDATPPPYVHEAFASQFRRLADAQIPVILLVGNHDQHSQGNGGASLSIYRTLVVP
GFIVGDTITTHRLNTRNGEIQVITLPWLNRSTLLTRPETEGLALAEVNELLIERLQPVLE
AEIRRKDASLPTVLLGHLMADRANLGAEKLLAVGKGFTIPISMLIRPELDYVALGHVHKH
QNLNPTNDPPIIYPGSIERVDFSEEKEDKGYILLEVEPGKVNWQFCPLPARPFLTIEIDV
SKEEDPNQAILNAIAKQDITDRVVRLIYKLRSEQLDLINNAAIDRVLQTAHSYSSRPELI
SQLSRSRLPELGVGNSLDPIEALTTYLNNREDLQDIRQDLLNAASVLLNAN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgatgtgatgattaaaattctacatttatctgacattcacatgggtagcgga
ttttcccacggtagggttaatccagaaacaggtattaatactagacttgaagacttcata
aattgtttacgtatttgtatagatagagcgatcgccgaacctgtagacttagtattattt
gctggagatgcttttcctgatgctactcctcccccttatgtacatgaagcctttgcaagt
cagtttcgacgtttggctgatgctcaaattccagtaattttattagtaggtaatcacgat
caacactctcaaggtaatgggggggcaagcttatctatctatcgtaccttagttgttcct
ggatttatcgttggtgataccattactacccatcgcctcaacactcgcaatggcgaaatt
caagttattactctcccttggttaaatcgttctaccttattaactcgtcctgaaacggaa
ggtttggcattggcagaagttaatgagttactcatagaaagattgcagccagttttagaa
gcagaaatccgccgtaaggacgctagtttgcctacggttttattaggtcatttgatggca
gatagggcaaatttgggagcagaaaagttattagctgtgggcaaaggttttactattcct
atttccatgttaattcgccctgaattggattatgtggctttaggtcatgttcataaacat
caaaatcttaacccaactaatgatcctcctattatttacccaggtagtattgaacgggta
gattttagtgaagaaaaagaggataagggttatattttactggaagttgaaccaggtaag
gtaaattggcaattttgtccgcttcctgcgcgtccttttttaactattgagattgatgtt
tctaaagaagaagatcctaatcaagctatactcaacgccatagccaaacaggatattact
gatcgtgtggtgcgtttaatttataaattgcgctcagaacaattagatttaattaataat
gctgctatagatcgggttttgcaaactgcccatagctatagtagtcgtcctgaattaatt
agtcagttatctcgttctcgtttaccagaattaggagtaggtaatagtttagaccctata
gaagccctaacgacctatttaaataaccgagaggatctgcaagatattcgtcaagatctt
ttaaatgctgcgtctgttttgcttaatgctaattga
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