Chondrocystis sp. NIES-4102: NIES4102_21580
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Entry
NIES4102_21580 CDS
T05085
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon00300
Lysine biosynthesis
chon00470
D-Amino acid metabolism
chon01100
Metabolic pathways
chon01110
Biosynthesis of secondary metabolites
chon01120
Microbial metabolism in diverse environments
chon01230
Biosynthesis of amino acids
Module
chon_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES4102_21580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES4102_21580
Enzymes [BR:
chon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES4102_21580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAZ45140
UniProt:
A0A1Z4RRT0
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All DBs
Position
2447679..2449088
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AA seq
469 aa
AA seq
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MLSTDRSLPNTGHRYIPQITDLNIPSAPNQELLPLTAKVNTQNHLEIGGCDLTELVAKYG
SPLYVLDEFTLRTACRQYRDSFASYYGGESQVIYASKAWSCLAVCSIIASEGLGFDVVSG
GELYTTLQAGVSKEKIYFHGNNKSIAELEYAVATGCTIIIDNWLELKNLTRIAAEQSPKP
VPVMVRLTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFTYLSQQESLHCIGLHAHIGSQ
IFERQPHQDLGEVLVDWFVKAQRYNLPVTTLNVGGGLGIQYTESDDPPSISQWVKAVCGA
VEDACTKASMPLPKLIAEPGRSLIGSACVTAYTVGSRKEIPQMRTYIAVDGGMSDNPRPI
TYQSVYRAVVANRMSEPLSEQVTVAGKHCESGDVVIKDASLPKTEPGDILVVMDTGAYNY
SMASNYNRIGRPAAVVVYEGEANLIIERETYHNLIERDRLPERLVKPEN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgaccgatcgcagtttaccaaatactggacatcgttatattcctcaaattaca
gatttaaatattccttctgctcctaaccaagagctattacccttaactgctaaggtcaat
acccaaaatcatttggaaataggtggttgcgatcttacagaattggttgccaaatatggc
tctcctctatatgttctggatgaatttactttaagaactgcttgtcggcaatatcgtgat
agttttgctagttattatggtggagagtcgcaagttatttatgcttctaaagcctggagt
tgtctagctgtttgtagtataattgccagcgaaggtttaggttttgatgtggtatctgga
ggggaactatatacaaccctacaagcaggcgtaagtaaagagaagatttattttcatggt
aataataagtctatagcagaattagaatatgccgtagcaacaggttgtacgattattatt
gataattggttggagttaaaaaatttaacccgtatagctgccgaacaaagtcctaaacca
gtcccagttatggtgcgcctcactcctggtattgagtgtcatacccacgaatatatccgt
acagggcatttagatagtaagtttggttttgaccctaatcaactagatgaagtatttacc
tatcttagccaacaagagagcttacattgtatagggttacacgcccatatcggttcgcaa
atttttgagcgtcaacctcatcaggatttaggagaagtattggttgattggtttgttaaa
gctcagcgatataatttgcctgtaacaactcttaatgttggtggtgggttgggaattcag
tataccgaatctgatgatcctccaagtatttcccaatgggttaaagctgtatgtggcgca
gttgaagatgcttgtactaaggcttctatgcccctacctaaattaatcgctgaacctgga
cgatctttaattggttctgcttgtgttacagcctatactgtcggtagccgtaaagaaatt
cctcaaatgcgtacttatatcgctgtagatggtggaatgtctgataatcctcgcccaatt
acttatcaatcagtgtatcgagccgtggtggctaatcggatgtccgagcctttaagcgag
caggtaacagtggctggaaaacattgtgaatcgggtgatgtagttattaaagatgcttcc
ttgcctaaaactgaacctggagatattttagtggtaatggatacaggcgcgtacaattac
agcatggcatctaactataatcgtattggtagacctgcagcagtagtggtttatgaaggt
gaagccaatttaattattgaacgtgaaacttatcataatttaatcgaacgcgatcgccta
ccagaaagactggtaaaaccagaaaactag
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