Chondrocystis sp. NIES-4102: NIES4102_22780
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Entry
NIES4102_22780 CDS
T05085
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_22780
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_22780
Enzymes [BR:
chon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIES4102_22780
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Topoisomerases
NIES4102_22780
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES4102_22780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3450
ATG14
KxDL
DUF5741
Sec2p
DUF1664
Motif
Other DBs
NCBI-ProteinID:
BAZ45259
UniProt:
A0A1Z4RS10
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Position
complement(2583117..2585639)
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AA seq
840 aa
AA seq
DB search
MAQQLNLLGNGQIIPTPLHQEMERSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMYEL
GLTPDRPYRKCARVVGDVLGKYHPHGDQSVYDALVRLVQDFSTRYPLLDGHGNFGSVDND
PPAAMRYTETRLAPIAYEAMLTEIGEATVNFTDNFDNSQTEPIVLPVQLPILLLNGCSGI
AVGMATNIPPHNLGEVVDGLIALIDRPNLTDEQLWELIPGPDFPTGGEIVELQGIQDAYS
TGKGIIKMRGIAQIEKLTVGNKRRKEKKAIIITELPYQVNKASWIEKVAELVNIGKIEGI
SDIRDESDRSGMRVVIELKKDATAPKVLQQLYRQTALQSNFGTIMLALVNNKPIQLSLRG
MLEEFLKFREHTLTRQYTHELEQAEEKLHLVAGLLLALNQIDRVIDILRHAPDGITAKLR
LQEELDFTPTQSDSILAMPMRRLTGLEKQKLESESTELQQRIAELKKILSDRTELLKSFK
KELRSLKRKFADVRRTRIINVVNSEPVEAALTQVTTTPQKIPDPALVVSPTLTFERSAQA
SLTVTNSACIYWQNPIADTEVGKTIPKNGDDFIIEQETIGDRENLVVVTDSGKAYPVNIT
EIPSSIETTELSALELLSSAAQRDATTTVAHFFPPANHQPQLDLIMLTANGIIKRLEATE
LDGLGNRGLVLIKLKDQDTLKYFCLAKPEQEIVIATTGGRILRLPINDTQIPSMGRNAQG
NRVMRLRLKEAIVGCCVVNAQDSLAVITQQGFGKRLGVNSLRLANRGDIGTQAIGFNSKE
DLLAGIINTKGRENITLTTSIDRRLILPVDSLSLAEKNSTGATIGKLKPNEIITGIYPYV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcagcttaatttgttaggtaatgggcagatcattcctacccctcttcatcaa
gaaatggagaggtcatatcttgaatatgcaatgagcgttatagtcggtagagccttaccc
gacgtaagagatggattaaaacctgtccatcgtcgaattctctatgctatgtacgagttg
ggattgaccccagatcgaccctacagaaaatgcgctcgtgtggtgggggacgtattaggt
aaatatcatccccacggcgatcaatcggtctatgatgctttagtgcgtttggtacaggat
ttttctacccgttatcctttattggatggtcatggtaattttgggtcggtggataatgat
ccccctgctgccatgcgctacaccgaaaccagacttgcgcccatagcttatgaggcgatg
ttaactgaaattggcgaggctacggttaactttactgataactttgataattctcaaact
gaacccattgtcttacctgtccaattaccaattctactgttaaatggttgttcgggaatt
gcggtggggatggcaaccaatattccaccccataatttaggggaagtggtggacggttta
attgctttgatcgatcgccctaatttaactgatgagcaactgtgggagttgattcctggc
cctgattttcccacagggggggaaattgtagaattacaaggtattcaggatgcttacagt
acaggtaaaggcatcattaaaatgcgcggtattgcccaaattgaaaaattaactgtaggt
aataagcgacgcaaggaaaagaaagcgattattattactgaattaccctatcaggtaaat
aaagcaagctggattgaaaaagttgctgaattggtaaatataggcaaaattgaaggaatt
tctgatattcgggatgagagcgatcgcagtggtatgcgcgtggttattgaactaaaaaaa
gatgctactgctcccaaggttttacaacaattgtatcgtcagacagccttacaaagtaat
ttcgggacaattatgctggcattggtcaataataagccgattcagctatctttacgggga
atgctcgaggaattcctcaaattccgtgaacacaccttaacgaggcaatatacccacgaa
ttagaacaagcagaggaaaaactacatttagtagcaggtttattacttgccctcaatcaa
attgatagggtgatcgacatcttacgtcatgcacccgatggcattactgctaagttacgt
ttacaggaagaattagactttacccccacccagtccgattctattctcgccatgccaatg
cgtcgcctaactggtttggaaaagcaaaaactagagagtgaatcaacagagttacaacag
cgtattgcagaacttaaaaaaatattaagcgatcgcactgaattacttaaatcttttaaa
aaggaattacgttctctcaagcgtaaatttgctgatgtgcgtcgcactcgtattattaat
gtggttaatagtgaacctgtcgaggctgcactaacccaagtaaccacaactcctcaaaaa
atccccgatcctgccttagtagtctctcccaccctcacttttgaacgctctgcacaagcg
agtttaaccgttactaattctgcttgtatttattggcaaaatcctattgcagatacggag
gttggtaagactattcctaaaaatggtgatgattttattatcgagcaagaaacaattggc
gatcgcgaaaatttagtggtggttactgatagtggtaaggcttatcctgtcaacattact
gaaatcccctcaagtatcgaaacaaccgaattatcagccctagaattattatcttccgca
gcccagcgcgatgctacaactactgtggctcattttttcccacctgcaaatcatcaacct
cagttagatttaattatgctgacggcaaacggaattattaaacgtttagaagcaactgaa
ttggatggtttaggtaatcggggtttagtgttgattaagctcaaagatcaagatacttta
aagtatttttgtctggcaaaacccgaacaagaaatagttattgctactacgggagggcgg
atcttacgtttacctatcaatgatactcaaatccccagtatgggtagaaatgctcagggt
aatcgggtaatgcgtttgagattgaaggaagctattgtaggctgttgtgtggtaaatgcc
caagactccttagcagtgattactcaacaaggttttggtaaacgccttggtgttaatagt
ttacgattagctaatcgtggtgatattggtactcaagccattgggtttaatagtaaggag
gatttactggcaggaattattaatactaagggtagggaaaatattactttaaccactagt
attgatcgtcggttaatattacccgtagatagccttagtctggctgaaaaaaatagcacg
ggggcaacaattggtaagcttaaacctaatgagattattactggaatttatccttatgtt
taa
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