Chondrocystis sp. NIES-4102: NIES4102_25230
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Entry
NIES4102_25230 CDS
T05085
Symbol
rnz
Name
(GenBank) tRNA 3' endonuclease RNase Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_25230 (rnz)
Enzymes [BR:
chon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES4102_25230 (rnz)
Transfer RNA biogenesis [BR:
chon03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES4102_25230 (rnz)
Prokaryotic type
NIES4102_25230 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
BAZ45499
LinkDB
All DBs
Position
complement(2868586..2869545)
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AA seq
319 aa
AA seq
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MEITFLGTSSGVPTRSRNVSSVALRLPQRGEVWLLDCGEGTQHQLQRSEIKSSQIRRIFI
THMHGDHTFGLMGLIASCGLAGSGQLIDIYGAEGLSEYLHAAAKYSYINLGSRLNIHTVK
PGIVYEDEEFIVSCQLLKHRVPAYGYRIEEKDRPGTFNLAKAQSLGIPPGPIYGKLKQGE
IVTLDDGRQINGQDLCGQPEVGRKVVYCTDTVFCDSAVELSQDADVLIHEATFAHQDAQM
AFEKMHSTSTMAAQVALLAGVKQLIMTHFSPRYAPGNPIELNDLKQEARAIFPNTKLAYD
FYTYEVPRRREAKEKVKVG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtggaaataacgtttttaggtacaagttctggagtcccaacgcgatcgcggaatgtttct
agtgtcgccctacgtcttcctcaacgtggcgaagtttggctattagactgcggagaaggt
acacaacatcaacttcaacgtagtgaaattaaaagctctcaaattcgtcgtatctttatt
acccatatgcacggcgatcatacctttgggttaatgggtttgattgctagttgtgggttg
gctggtagtggtcaactaatagatatctatggtgctgaggggttatcggaatatcttcat
gctgctgctaaatattcctatattaatttgggttctcgccttaatattcacaccgttaaa
ccaggcatagtatacgaagacgaggaatttattgttagttgtcagctacttaaacatcgt
gtaccagcctatggttatcgcattgaggaaaaagaccgcccaggaacatttaatctagcc
aaagctcaatcattaggtattcctccaggcccaatttatggcaagctaaaacaaggggaa
atagttactttagatgatggtcgtcagattaatggtcaagatctatgcggtcaaccagaa
gtaggacgcaaagtagtttattgcaccgatacagtattttgtgactcagcagtagaatta
tcccaagatgctgatgttttaattcatgaggcgacctttgcccatcaagatgcccagatg
gcatttgaaaagatgcactccactagtactatggcagcccaagtagctttattggctggg
gtcaaacaattaattatgacccattttagccctcgctatgcccctggtaatcctatcgag
ttaaatgatctaaaacaggaagctagagcaatctttcccaatactaagcttgcttatgat
ttttatacctatgaagtgccaagacgcagagaagccaaggaaaaagtaaaagtaggataa
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