Chondrocystis sp. NIES-4102: NIES4102_26640
Help
Entry
NIES4102_26640 CDS
T05085
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES4102_26640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chon03019
]
NIES4102_26640
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_26640
Enzymes [BR:
chon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NIES4102_26640
Messenger RNA biogenesis [BR:
chon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NIES4102_26640
Transfer RNA biogenesis [BR:
chon03016
]
Prokaryotic type
tRNA degradation factors
NIES4102_26640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
BAZ45638
UniProt:
A0A1Z4RT51
LinkDB
All DBs
Position
complement(3034345..3036492)
Genome browser
AA seq
715 aa
AA seq
DB search
MQEFDKSISFDGRDIRLKVGLLAPQAGGSVLVQSGDTAVLVTATSAPGREGVDFLPLTVD
YEERQYAAGRIPGGFFRREGRPGEKAILTSRLIDRPIRPLFPGWLRDDIQIVATTLSMDE
DVPPDVLAVTGASVAVLLAQIPFYGPMAAVRVGLVGDDFILNPTYKEIKRGDLDIVVAGS
PDGIVMVEAGANQLPEQDMIEAIDFAYEAIQELIEAQRELLRDLGIEKLIPQKPEEDQTL
ANFISDRATADIKKILSQYDLDKNGRDAALDEIKKTQISDVIAELNENDPLVVMTTADSK
AIDNAFKSITKKLMRSQIIEEGMRVDGRKLDQVRPITSRVGILPERVHGSGLFRRGLTQV
LSITTLGTSGDAQNTSDDLNPQDEKRYLHHYNFPPYSVGETRPMRSPGRREIGHGALAER
ALVPVLPSAETFPYVIRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPITKPVSGAAMGLI
KEQDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLSVEVIAQAIQQALPA
RIHILQEMLKVISQPRQELSPYAPRLLTMKIDPELIGVVIGPSGKTIKAITEQTGAKIDI
EDDGTVIIAAVEAEKAEKARKMVYNITRKLNEGDVYVGKVTRIIDIGAFVEILPGKEGMI
HISQLAEGRVGKVDDEVAVGDEIVVKIRGFDQKNRLNLTRLGIHPDEAAEARASM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatttgacaagtcgatatcctttgatggtcgtgatattcgactcaaagtaggc
ttgctcgcaccacaagcaggtggttcagtgttggtgcaatcaggagatacagcagttcta
gttacggcaactagcgcaccagggagagaaggtgtagatttcttaccattaacggtagat
tacgaagaaagacaatatgcagcaggacgtattcctggtggtttttttaggcgagagggt
agacctggagagaaagcaattcttactagtcggttaatagatcgcccaattcgtcctttg
tttcctggttggctaagagacgatattcaaattgttgcaactaccttatcgatggatgaa
gatgtacccccagatgttttagcggtaacgggggcttctgtggcagtattattggcgcaa
attccgttttacggcccaatggcagcagtgagagtaggtttagtaggagatgattttata
ttaaatcccacctataaagagattaaaagaggtgatctagatatagtagttgcaggtagt
cctgacggtattgtcatggtagaagcaggtgcaaatcaactaccagagcaagatatgatc
gaggcgatcgattttgcttatgaagcaattcaagaattaattgaggcacagcgagaacta
cttagagacttgggaattgaaaaactgataccacaaaagccagaagaagatcaaactcta
gctaactttatcagcgatcgcgccaccgcagacattaaaaagattctgtctcaatatgac
ctagataagaatggtcgagatgcagctttagatgagatcaaaaagacacaaatcagcgat
gtaattgccgaactaaatgaaaatgatccattagtggtaatgactacagcagattccaaa
gcgatcgacaatgcttttaaatcaattactaaaaagttgatgcgcagtcaaattatcgaa
gaaggaatgagggttgatggacgtaaattagatcaagtaagaccaataacctcaagagta
ggaattttacctgagcgagtacatggaagcggtttatttagaagaggcttaactcaagtt
ctctctattaccaccttgggtacatcaggggatgcccaaaataccagtgacgatctcaac
cctcaagatgaaaaacgctatcttcatcattacaacttcccaccctattccgtcggtgaa
actcgacccatgcgatcgcctggacgtagagagattggtcatggtgcattagcagaaagg
gctttagtccccgtgctacctagtgcagaaacttttccctatgtaattcgagttgtttct
gaagttttatcttccaatggctcaacctcaatgggttcagtctgcggttcaactttatct
ttgatggatgcaggcgtacctataactaaacctgtaagtggtgcagctatgggtttaatt
aaagagcaagacgaagtcagaattctaaccgatatccagggaattgaagactttttgggt
gatatggatttcaaggttgcagggacggatacaggaattacagccttgcaaatggatatg
aagatcacaggtttatcagtagaagttattgcacaagcaattcaacaagctttacctgct
cggatacatattctgcaagagatgctcaaagtaatatctcaaccacgtcaggaattatct
ccttatgcacccagactcttaactatgaaaatagatcctgagttgattggtgtggttatt
ggtccttctggtaaaaccattaaagccattaccgagcaaactggagctaaaattgatatt
gaagacgatggtacagtaattatcgctgcggtggaagctgaaaaagcagaaaaagctcgc
aagatggtatacaacattacccgtaaactaaatgagggagatgtttatgttggtaaagtt
actagaataattgacatcggtgcttttgtagagattttgccaggtaaggaagggatgatc
catatctcccagctagctgaaggtagagttggcaaggtagatgatgaggtagcagtcggc
gacgaaatcgtggtaaaaatacgtggttttgatcagaaaaaccgtttaaacttaaccaga
ttgggtattcatcctgatgaagcagccgaagctagagcctcaatgtaa
DBGET
integrated database retrieval system
