Chondrocystis sp. NIES-4102: NIES4102_28130
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Entry
NIES4102_28130 CDS
T05085
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03030
DNA replication
chon03430
Mismatch repair
chon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES4102_28130
03430 Mismatch repair
NIES4102_28130
03440 Homologous recombination
NIES4102_28130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_28130
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_28130
Enzymes [BR:
chon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES4102_28130
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES4102_28130
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES4102_28130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Asparaginase
Motif
Other DBs
NCBI-ProteinID:
BAZ45787
UniProt:
A0A1Z4RTJ6
LinkDB
All DBs
Position
3202926..3203879
Genome browser
AA seq
317 aa
AA seq
DB search
MNDPSLKELLGQDPVVELLQQAVKLKRIAPAYLFLGTSGIGRAKTAKNFIKLIFKVGIDP
EKHSLIEKKLASNNHPDLLWVEPTYTHKGELYTVTQAHAQGLAIKTPAKIRIEQIRNLIE
FLNRPLLEASRKIVVIEGAETMAETAANALLKTLEEPGKATIILFAPDVDSLLTTLVSRC
QRLQFLPLSQTNLIRVLQEQGYQEIIEHPQIMAIAQGSPGKAIAAWQTLQTIPQQLLIRL
TKAISTPLEAIELAQIITSELDGQTQLWLVDYLQHYYWQQHQQVQLIQLWEKTRQYLLSY
VQPRLVWECALIKLCEN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatccatctttaaaagaattattaggtcaagatccagtagtagagctattgcaa
caggcagtaaaattaaaacgtattgctcctgcctatttatttctaggtacttctggtatt
ggacgggctaagacagctaaaaactttattaaattgatatttaaagttggtatcgatccc
gaaaaacattctttaattgagaaaaaattagcctccaataatcaccctgatttactatgg
gtagaacctacctatacccataaaggggaattatataccgttactcaagctcatgctcaa
gggttagctattaaaactccagctaaaattaggatagagcaaatacgcaatctgattgag
tttttaaatcgtcctttgctcgaagccagcaggaaaattgtggtgatcgaaggggcggag
actatggcggagacggcagctaacgctttattaaaaaccttagaagagcctggtaaagcg
acaatcattttatttgcgcctgatgtagattctttgctaactaccctagtgtctcgctgt
cagcgtctacaatttttacccttatcccaaactaatttaattagggtgttgcaagagcaa
ggttatcaagaaattatagaacatcctcaaattatggcgatcgctcaaggaagtcctggt
aaagccattgcagcttggcaaacattacaaactattcctcaacaacttttaattaggtta
actaaagctatttcaacccctttagaggctatagaattggctcaaataattactagcgaa
ttggatggacagacccaactttggttagtagactatttacaacattactattggcaacaa
catcaacaagtacaattaattcagctttgggaaaagactcgtcaatacttgctctcctac
gtgcaacctcgtctagtttgggagtgtgccttaattaagctgtgtgagaattaa
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