Chondrocystis sp. NIES-4102: NIES4102_29010
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Entry
NIES4102_29010 CDS
T05085
Name
(GenBank) periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES4102_29010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chon02000
]
NIES4102_29010
Transporters [BR:
chon02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NIES4102_29010
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GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAZ45873
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Position
3301671..3302846
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AA seq
391 aa
AA seq
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MKSAISRRYFLYASLGATLSQILGGCSNSATITQILFLENSIPVQLIKDFQKTLKSDNKT
DFQPQNQFKQIFDSLTRWQQSKNEDKKTQGLIDKILNRPIIYPSVTSLGDFWLSDAIEQN
LIKPLAINNLAGWQKLPKTWQQLVQRNQQGYLTQEGTIWGAPYRWGSTVIAYQSKKLEKL
NITIKDWQDLWQPELRDRLSLLDSYREVIGLTLKKMGYSYNTQNINSISNLEKELLALHK
QTKLYSSDRYLEPLVLGDTLVAVAWSSDILPILKQYPEIKFIIPPSGTSLWADIWVEPQI
SQVSNKDHNQALINSWIDFCWQSKAAQQISLFTSGISPITRSLKRSELSTDLQDNVFINS
EVLYSEKSEFLLPLEPAINQQYRDLWLKIRQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgccatatctcgtcgttattttctctacgctagtcttggtgctactttgagt
caaattttgggaggttgtagtaattcagcaacaattacacaaatattatttttagaaaat
tctattcctgtccagttaattaaggactttcagaaaacacttaaatctgacaataaaact
gattttcaacctcaaaaccaattcaagcaaatatttgattcacttactcgttggcaacaa
agcaagaatgaagataaaaaaactcagggattgatagataaaatactaaatagaccgata
atttatcccagtgtaactagtttaggagacttttggttgtctgatgccattgagcaaaac
ctgattaaacctttggcaattaataatttagcaggttggcaaaaactccctaaaacttgg
caacaattagttcaacgtaatcaacaagggtatttaacccaagaaggtacaatttggggt
gcgccctatcgttggggtagtacagtaattgcttatcaaagtaagaagttagaaaagtta
aatattaccattaaagattggcaggatctttggcaaccagaattacgcgatcgcctttct
ttgttagattcatatcgagaagttattggtttaactctcaaaaaaatgggttattcttac
aacacgcaaaatattaattcaatctctaatttagaaaaggaattattagctttacataaa
caaacaaaattatacagttcggatcgttatttagagcctttggtattaggtgatacattg
gttgcagttgcttggtcttcggatatattacctatacttaaacaatatcctgaaattaaa
tttattattccgccttcaggtacatctttatgggcagatatttgggtagaacctcagata
tcccaagtaagtaataaggatcacaatcaagctttaattaattcatggattgatttttgc
tggcaatcgaaggcagcccaacaaatatctttatttacttcaggaatttctcctattact
cgctctttaaagagatcagaactatctacagatctgcaagataatgtatttattaattca
gaggttttatattccgaaaaaagtgaatttctcctacctctagaaccagcaattaaccag
caatatcgagatttatggcttaaaattaggcaataa
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