Chondrocystis sp. NIES-4102: NIES4102_30030
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Entry
NIES4102_30030 CDS
T05085
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon00521
Streptomycin biosynthesis
chon00523
Polyketide sugar unit biosynthesis
chon00525
Acarbose and validamycin biosynthesis
chon00541
Biosynthesis of various nucleotide sugars
chon01100
Metabolic pathways
chon01110
Biosynthesis of secondary metabolites
chon01250
Biosynthesis of nucleotide sugars
Module
chon_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIES4102_30030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NIES4102_30030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NIES4102_30030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NIES4102_30030 (rfbB)
00525 Acarbose and validamycin biosynthesis
NIES4102_30030 (rfbB)
Enzymes [BR:
chon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NIES4102_30030 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BAZ45975
UniProt:
A0A1Z4RU45
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All DBs
Position
complement(3428009..3429091)
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AA seq
360 aa
AA seq
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MEENNRQSRRILITGGAGFIGSNFVHHWCNKYQSDRVVVLDALTYAGNQENLASLKDNPN
LKFVQGDIGDRALVDNLLESEAIDTVAHLAAESHVDRSILGPGAFVQTNVVGTFTLLEAF
RQRWNQRQQPQTDRFLHVSTDEVYGSLEADDPAFSETTPYSPNSPYSASKAGSDHLARAY
FHTYGMPTIITNCSNNYGPYHFPEKLIPLMCINILLGKPLPVYGDGENIRDWLYVEDHCR
ALDVVIHRGKPGETYNVGGNNEVKNIDLVKQLCKLMDELAPDLPVRPASDLITFVKDRAG
HDRRYAIDASKIQRELGWTPKETVEAGLRRTVEWYLNHRHWWQPLLSQEYKSYYQQVYAN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaataatagacagtcgcgcaggattttaattacaggaggggcaggttttatc
ggctctaactttgtgcatcattggtgtaataaatatcaaagcgatcgcgtagtagtttta
gatgctcttacctatgcaggtaatcaagaaaatttagccagtttaaaggataatcctaac
ctaaaatttgtccagggggacattggcgatcgcgctttagtcgataacttattagaatca
gaagctattgatacggtggctcatttagctgccgagtcccatgtagatcgttctatactg
ggccctggggcatttgtacaaaccaatgtcgtcggcacttttacccttttagaagctttt
cgccaacgctggaatcaaagacaacaaccccaaacagaccgattcttacacgtctctaca
gatgaagtttatggcagcttagaagcggatgatccagcttttagtgaaactactccctat
agtcccaatagtccctattccgcctctaaagcaggtagtgatcacttagccagggcatat
tttcatacctacggaatgccgacaattatcactaattgttctaataattatggcccttat
catttccctgaaaagttaatcccgttgatgtgtattaatattttgctgggtaagccttta
cctgtgtatggcgacggcgagaatattcgagattggctttatgtagaagatcattgtcgt
gctttagatgtagtaattcatcgaggtaaacctggcgaaacttataatgttggtggcaat
aatgaagttaaaaatattgatctggtaaaacaactgtgtaaattaatggatgagcttgct
cctgatttacctgtgcgtcctgctagtgatttaattacttttgtcaaagaccgtgcagga
cacgatcgccgttatgctattgatgctagtaaaattcaacgtgagcttggctggactcct
aaagaaacggtagaagctggcttacgtcgtactgttgaatggtatcttaatcatcgccac
tggtggcaaccattattaagtcaggagtataaaagttattatcaacaggtttatgccaat
taa
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