Chondrocystis sp. NIES-4102: NIES4102_31790
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Entry
NIES4102_31790 CDS
T05085
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NIES4102_31790
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
TFA2_Winged_2
HHH
HHH_6
DUF7645
HHH_2
Peripla_BP_4
Staph_reg_Sar_Rot
ATP-synt_ab_C
PRANC
CC_PcsB
Motif
Other DBs
NCBI-ProteinID:
BAZ46150
UniProt:
A0A1Z4RUK7
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All DBs
Position
3614015..3616171
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AA seq
718 aa
AA seq
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MIDIRQLITKEFSLSSSQVNNALDLWLDGGTVPFIARYRKEQTGSLDEVQLRNIFDRYNY
LDELSKRQEKILSEIAAQGKLSEELQAKIINCLNKTELEDLYLPYKPKRRTRATVAKEKG
LEPLAVWIAAHNQAKISQIDLIAEASKYVDAQKQVDNIETAIAGAADILAEQVADKAEIR
AYLREYFVKEGVFVSQIKDDYPEGSTKYEMYRNYSYSVSKIPPHHILALYRGESEGILNV
DITIDESAILAYLEKQEIKTRVATLKEFYHSMLKDAYNRLIKPSIIREVRSDRKDYADLE
SIQTFEANLRNLLLASPAGMKPTLGIDPGFRTGCKVVVLSDTGKYLAYQAIYPHSGENQR
QQASIIISNFINKYQIELIAIGNGTASRETDQFISEVLQQLEVKPIKVIVNESGASVYSA
SEVARAEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVNQKLLKEKLEA
SVESCVNYVGVDLNTASKELLTFVSGISPTIANNIVSYRNEQGAFKNRKELLKVAKLGKK
TFEQAAGFLRIRDGNNPLDNTAVHPESYAVIEQIAKSLNVSLKQITQVGDSLKKLDLKQF
VTKEIGLPTLQDAIKELEKPGRDPREQFQYATFKEGVAEISDLTPGMILEGVVTNVVNFG
AFVDIGVHQDGLVHISHLGDRFVNDPNEVVKVGQIVKIKVLQINEKLKRISLSIKEAR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgattgatattcgacaattaattactaaagaattctccttatcatcatcacaggttaat
aacgctttagatctttggttggacggggggacagtcccttttattgctcgttatcgtaaa
gaacaaactggttcactcgatgaagtacagttaaggaatatttttgatcgctacaattat
cttgatgaacttagtaaacgtcaagagaaaatactatcggaaattgcagcccaaggtaag
ttaagcgaggaattacaagctaaaataattaattgtcttaataaaaccgaactggaagat
ttatatttaccttataaacccaaacgacgtactagagctactgttgcgaaagaaaagggt
ttagagccactagcagtttggattgcagcccataatcaagcaaaaatatctcagatagat
ctaatcgccgaagccagtaaatatgttgatgcccaaaagcaggtagataacatagaaact
gccattgcaggagcagcagatatcttagccgagcaagtggcagataaagccgaaattcga
gcttatttacgggaatattttgtcaaagagggtgtatttgtctcccaaattaaagatgat
taccccgaaggtagtactaaatatgaaatgtatcgcaactatagttatagtgtaagtaag
attccgcctcaccatatattagctctctatcgtggcgaaagtgaaggtattttaaatgtt
gatataactatcgatgaatcggcaatcttagcttatctagagaagcaagaaattaagaca
agggtagccacattaaaagaattttaccattcaatgcttaaggatgcctataaccgtctg
attaaaccatctataattagggaagttagaagcgatcgcaaggattatgctgatttagaa
tctattcaaacttttgaagctaatctacgtaacctattactcgcctcgcctgcgggaatg
aaaccaaccttgggtatcgatcctggatttcgtacagggtgtaaagtggtggtgttgtcg
gatacagggaagtatttagcctatcaggcaatctatccccattcaggagaaaaccaaaga
caacaagcaagcataattattagcaattttatcaataaatatcagatcgaattaattgcg
atcggtaatggcacggcttctagggaaacagatcagtttattagcgaagttttacaacaa
ttggaagttaaaccgattaaagtaattgttaatgaatctggagcgtcggtttattctgct
agtgaagtggcgcgtgcggaatttcctgatttagatattaccgtgcgaggagcaattagt
attggtagaaggttacaagatcctttggcagaattggtaaaaatagatcctaaatctatt
ggggtagggcaatatcagcatgatgttaaccaaaaattattaaaggaaaaattggaagcg
agtgttgaaagttgtgttaattatgttggggtagatttaaataccgcatcaaaagaatta
ctgacttttgtatcaggaatatcccccacaattgccaataatattgtaagttaccgcaac
gaacaaggagcttttaaaaatagaaaagaactattaaaagtagctaagttaggtaagaaa
acttttgaacaagcagcagggtttttaagaattcgtgatggtaataatcctttggataat
acagcagtgcatcctgaaagttatgccgtaattgaacaaatagccaaaagtcttaacgtt
tccctcaagcaaattacgcaagtaggagatagtttaaaaaagttggatcttaaacaattt
gtgactaaagaaattggtttaccaaccctacaagatgctatcaaagaattagaaaaacca
ggacgtgatccaagagaacaatttcaatacgctacttttaaagaaggagttgccgaaatt
agtgatttaaccccaggaatgatcttagagggagtagtgactaatgtagttaactttggt
gcttttgtagatattggtgtacatcaagacggtttagtacatatttctcacttaggcgat
cgctttgtcaatgatcctaatgaagttgttaaagttggacaaatagttaaaattaaggtt
ttgcaaattaatgaaaagctaaaaagaattagtttatctattaaagaagcacgataa
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