Chondrocystis sp. NIES-4102: NIES4102_32510
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Entry
NIES4102_32510 CDS
T05085
Symbol
topA1
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_32510 (topA1)
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_32510 (topA1)
Enzymes [BR:
chon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES4102_32510 (topA1)
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Topoisomerases
NIES4102_32510 (topA1)
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES4102_32510 (topA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
DUF4218
Motif
Other DBs
NCBI-ProteinID:
BAZ46222
UniProt:
A0A1Z4RUT2
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Position
3691154..3693838
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AA seq
894 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPSGYQVQASMGHVRDLPPSAKEIPPAYKDKQWATLGINVE
DDFQPIYVVPEKKKKVVKELKTALQTADELILATDEDREGESISWHLLEILKPKVPVKRM
VFHEITKEAIQKALKDCREVDQDLVHAQETRRILDRLVGYTVSPLLWKKISWGLSAGRVQ
SVAVRLTVARERERRAFQSGGYWDLLAYLEQDKNPFEARLITLDGKKLATGSDFDPDTGK
ITAGRDVVLLNETEANALKTRILNKTWTVANREEKATKRRPSPPFTTSTLQQESNRKLGI
SARETMSVAQKLYEKGFITYMRTDSVHLSQQAIAAARSCVEQMYGKEYLSPKARQYSTKS
KGAQEAHEAIRPAGETFRTPQETGLKDQEFKLYDLIWKRTVACQMADADLTQIAVDVKVE
NAVFRANGKRIEFPGYFRAYVEGSDNPDAAIEDQEILLPPLKVGDKPKCKKLEVVGHETQ
PPARYTEASLVKTLEKEGIGRPSTYATVISTIIDRGYVQMRGKALIPTFTAFAVTALLEE
HFPDLVDTEFTSKMEQTLDEIARGGADWIPYLKQFYQGETGLKTQIDVKSEEIEPALAKT
IYLENLDATVRIGKYGPYIEMPTDQGETEAIKISIPDELTPADLNPDQIAALIRQKQDGP
EKVGIHPETGEPIYFKVGKYGPYVQLGDKTEDNPKPKMSSIPKKDNKENLGIEDVSLDMA
VGLLSLPRLLGCHPATEGKIKAALGRFGPYVVHEFKGPEDTKLQRDYRSLKKEDDVLTVT
LDRALELLAEPKRSRGASKKVPLRELGLHPGDQEPINIYKGPYGNYVQHGKVNAGLPQEQ
EVETVTLAQALELLASKAATKKKTTRKTTATSKKTKTTKRKTTTAKKANSKSTE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacattagtcattgtcgaatctcctactaaagctcgtactattcgcaactacttg
ccttctggttatcaggttcaggcatcgatgggtcatgtccgcgatttacctccttcggct
aaagagattcctcccgcctataaagataagcaatgggctactttgggaatcaatgttgaa
gatgactttcagccaatttacgttgtccctgagaaaaagaagaaagtagttaaagaatta
aaaacagcactccagacggcagatgagttgattctggcaaccgacgaagatcgtgaaggg
gaaagtattagctggcatttattggagattctcaagcccaaagttcctgtaaaacgcatg
gttttccacgagattactaaagaagcaattcaaaaggctttaaaagactgtcgtgaagta
gatcaagatttagttcacgcccaggaaacacgacgcattttagatagattagttgggtat
accgtttctcctctgctttggaaaaagatttcttggggtttatcggcaggtagagtgcag
tcggtagcagtgcgtttaactgtcgccagagaaagagaacgtcgggcttttcaatctgga
ggatattgggatttactagcctatttagaacaggataagaatccttttgaagcaagatta
attaccctagatggtaaaaaattggcaactggtagcgattttgaccccgatacaggcaaa
attacagcaggtagggatgttgtattgctaaatgaaacagaagccaacgccttaaaaact
agaatacttaataaaacttggacagtagccaatcgagaagaaaaagcaactaaacgtcgt
ccctctccaccttttactacttccaccttacagcaggaatctaatcgcaaattgggcata
tctgccagggaaaccatgagtgttgcccaaaaactctatgaaaagggttttattacctat
atgcggacggattcagtacatttatcccaacaggcgatcgctgctgctcgtagttgtgta
gaacaaatgtatggcaaagaatatcttagtcctaaagcccgtcaatacagtactaaaagt
aaaggcgcacaggaagcacacgaagctattcgtcctgctggggaaacatttcgcactccc
caagaaacaggacttaaagaccaggagtttaagctttatgatttaatttggaaacgcacc
gttgcttgtcagatggcagatgccgatcttacccaaattgccgtcgatgttaaggttgaa
aatgctgtttttcgcgctaatggtaaacgtattgaatttcctggttatttccgtgcttat
gtagaaggttcggataatcccgatgcagccatagaagatcaagaaatcttgttaccacct
ctcaaggtaggggataagccaaagtgcaaaaaattggaggtagtaggacatgaaacccaa
cccccagcccgctatacggaagcatctttagttaaaactttggaaaaagagggaattggt
cgccctagtacttatgccacggtaattagcaccattattgaccgtggttatgtgcaaatg
cgaggtaaagctttaattcctacttttaccgcctttgctgttacagcacttttagaggag
cattttcctgatttagtagataccgaatttacttctaaaatggagcaaaccctagacgaa
atagctagagggggtgcagattggattccttatcttaaacagttctatcaaggcgaaaca
ggtttaaaaacacaaatagatgtcaaaagtgaagagatcgaacctgctttggctaaaact
atctatctagaaaacctcgatgctactgtccgtattggtaaatatggcccatacattgaa
atgccaacagatcaaggggaaacagaagcaattaaaatttctattcccgatgagcttacc
ccagcagatcttaatcctgatcaaattgcagccttaattcgccaaaagcaggatggaccc
gaaaaggttggtattcatccagaaacgggtgaacctatttactttaaagtgggtaaatat
ggcccctatgtacaactaggagataaaactgaggataatcctaagccgaaaatgagttct
attcctaaaaaagataacaaggaaaatctggggatagaagatgttagtttagatatggca
gtaggcttattatctcttcctcgtctattgggatgtcatcctgccacagaaggcaaaatt
aaggctgctttgggtcgttttggtccatatgttgttcatgagtttaaagggccagaagat
actaaattgcagcgagactatcgttctcttaagaaagaagatgatgtattgactgtgact
ttggatagggctttagaattattagcagaaccaaaacgctcacgcggtgctagtaaaaaa
gtacctttacgagagttgggactacatcctggcgatcaagaaccgattaatatttataag
ggcccctatggtaactatgtacaacatggcaaggtgaacgctggtttacctcaagaacag
gaagtagaaacagttactttagctcaagctttagaattgttagcatccaaggcagcaact
aaaaagaaaactaccagaaaaacaactgcaactagtaagaaaactaaaactactaaacgg
aaaacaactacagctaaaaaagctaatagtaagtcaacagaatga
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