Chondrocystis sp. NIES-4102: NIES4102_33690
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Entry
NIES4102_33690 CDS
T05085
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chon03016
]
NIES4102_33690
Enzymes [BR:
chon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NIES4102_33690
Transfer RNA biogenesis [BR:
chon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIES4102_33690
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Chap-C
Motif
Other DBs
NCBI-ProteinID:
BAZ46339
UniProt:
A0A1Z4RV54
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All DBs
Position
3825569..3827584
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AA seq
671 aa
AA seq
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MEQGKLIEFRVQGERRLAVVERPEGKKDWLVIDAGGQSHKIRPQRVEYTVEDVLYQPSEI
ASFLESVESYLDPSNLEVAWEILREEEGTVTPKQMAELLFSDQSPVLCYAAHCLLSQDKI
YFKQKADHYEPRSAVQVAEIKHQLEVQEQKNQEKSEFITHIRQALTGVKVDWSESDRTRL
ESIEKLALQSDNPSKVAQEILQQVNKNCDAQGAFQLLVEIGWWSRHENLFLRRSSYPVNF
SKKVLDVVQPRLQGDHISDSENRLDLVHLKVYTVDDESTTEIDDGLSIEYLDNGRIKIWI
HIADPTRLVVPGDELDLEARRRSTSLYLPTGMVSMFPTELATGPMSLVQGQICCALSFGV
ILDPTGGIEQYEIYSSLIKPTYRLTYDDVDEILQLGVQNEPEIADLAQQAQLRRSWRKAQ
GSIQIKMPESIIKVKDNDEVTIELVDSSPSRQLVAEMMILAGQIGGQYGTEHNIPLPFRG
QPQPELPSEEELLKLPAGPTRFCALRSCMPRSETSMSPIRHASLGLNSYVQVTSPIRRYT
DLLAHFQIKAHLKGEQLPFAKEELQEIVYSVGNSAYEATLVERQTNRYWGLEYLRRNAHC
IWNVLVLRWLREDENLALILIEDLGIELPHRFERSVALGERLEMLVTRADPQRDEVRFRE
VTEAEIQATSN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaggaaagctgattgagttcagagtacaaggcgaacgccgtcttgctgttgtc
gagcgaccagaaggaaaaaaagattggctcgtcatagatgctgggggacaatcacacaaa
atacgcccccaaagagtcgaatatacagtcgaggacgttctctatcaaccttcagagatc
gccagctttctagaatcagtagaatcttatttagaccctagtaatttagaagtagcttgg
gaaattttaagggaagaagaaggaacagtaacaccgaagcaaatggcagaattgttattt
tctgatcaaagtccagtgctttgttatgcagcccactgtcttcttagtcaagataaaatt
tattttaagcaaaaagcggatcactacgaaccccgttcagcagtacaagttgctgagatt
aagcatcagttagaagttcaagagcagaaaaatcaagaaaaatcagaatttattactcac
atccgtcaagctttaacaggagtaaaagtagactggagtgaaagcgatcgcactcgttta
gaatctatagaaaaattagctctccaaagtgataatccttctaaagttgcgcaagaaatt
ttgcaacaagtaaataaaaattgtgatgctcaaggagcttttcaactactggtagagata
ggatggtggagtagacatgaaaatctatttttacgtcgcagttcttatcccgtaaatttc
tcgaaaaaggtgcttgatgtggtacaacctcgtcttcaaggtgatcatatttcagactct
gaaaatcgtttagatttagtccatctcaaagtttatacagttgacgatgaaagtactaca
gaaatagacgatggtttgagcattgaatatttagacaatggtaggattaaaatttggata
catattgccgatcctacacgtttggttgtgcctggtgatgaattagatttagaagctcgc
cgtcgtagtactagtctatatttacctacggggatggtctctatgttccccacagaatta
gccacagggccgatgagtttagtacaaggtcaaatttgctgcgctcttagttttggggtc
attctagaccctacaggtggcatagagcaatacgaaatttattctagtttaatcaaacct
acctatcgcctgacctacgatgatgtggatgaaatattacagttaggcgtacaaaatgaa
cctgaaattgccgatttagcccaacaagcccagttaagaagatcatggagaaaggcacag
ggatcaattcaaattaaaatgccagaatcgatcatcaaagttaaagataatgacgaagta
accattgaactggttgatagttcgccttcgcgccaattggtagcagaaatgatgatctta
gcaggtcagataggtggtcagtacggcacagaacataacattccccttccctttagaggt
cagcctcaaccagaattaccatccgaagaagaattgctgaaattacccgcagggccgact
cgcttttgtgctttacgtagttgtatgcctcgtagtgaaactagtatgtctccaattcgt
catgctagtctcggtttaaatagctatgtgcaggtaacatcgccaattcgtcgttataca
gacttactagcacattttcaaattaaggctcatttaaaaggagaacaattaccttttgcc
aaagaagaacttcaggaaattgtttatagtgtaggtaattccgcttatgaggcaacatta
gtagaacgtcaaacaaatcgttattggggattagaatatctcaggcgtaatgcccactgt
atctggaacgttttagttttgcgctggttacgagaagacgaaaatttagctttaatttta
attgaagacttgggaatagaattaccccatcgctttgaacgttcagttgctttaggagaa
cgtttagagatgttggtaactcgtgctgatcctcaacgggatgaagttagattccgagaa
gttacggaagcagaaatacaagcgacttcaaattag
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