Chondrocystis sp. NIES-4102: NIES4102_36100
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Entry
NIES4102_36100 CDS
T05085
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon00020
Citrate cycle (TCA cycle)
chon00190
Oxidative phosphorylation
chon00650
Butanoate metabolism
chon00720
Other carbon fixation pathways
chon01100
Metabolic pathways
chon01110
Biosynthesis of secondary metabolites
chon01120
Microbial metabolism in diverse environments
chon01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIES4102_36100 (sdhA)
00650 Butanoate metabolism
NIES4102_36100 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NIES4102_36100 (sdhA)
00720 Other carbon fixation pathways
NIES4102_36100 (sdhA)
Enzymes [BR:
chon01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NIES4102_36100 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
NAD_binding_8
GIDA
Ku_PK_bind
FAD_binding_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BAZ46574
UniProt:
A0A1Z4RVT4
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Position
4105185..4107095
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AA seq
636 aa
AA seq
DB search
MLDAKIPPGRLQDKWDYYKDHCKLVSPANKKKYTILIVGTGLAGASAAATLAELGYNIKS
FCIQDSPRRAHSIAAQGGINGAKNYPNDGDTVWRLFYDTIKGGDYRSREANVHRLAQISN
QIIDQCVAQGVPFAREYSGLLANRSFGGSQVSRTFYAKGQTGQQLLLGAYSAMSRQIATG
KIQMFPRREMLDLVVVEGKARGIIVRNLITGAIERYAGDAVLLCTGGYSNVFYLSTNARN
SNVTAAWRCHKRGALFANPCFTQIHPTCIPVSGEYQSKLTLMSEGLRNDGRVWVSKIVGD
KRHPADIPEDQRDYYLETRYPSFGNLVPRDVASRNAKQVTDEGRGVGETGLAVYLDFRDA
IKKLGQQIISDRYDNLFQMYERITGENPYEVPMRIYPAVHYIMGGLWVDYNLMSTIAGLH
VLGEANFSDHGANRLGASALMQGLADGYFIIPYTLGNYLATHDLPPVNIDHPAFELSEAT
VNSNISKLLKIEGKKTVTEFHRQLGKIIWDYVGMSRNRAGLEQAIALIQDLRQEFWQNVT
IPQQQDTFNKNLEFAGRVADFLELGELMARDALAREESCGAHFREEYQTSEGEAQRNDRD
FAYVAAWQYQGNEQVPILHKEALEFDHVELTQRSYK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgctaaaattcccccaggtagactacaggataaatgggactactataaggat
cactgtaaattagttagtcctgcaaataagaaaaaatatactatcttaatagttggtaca
ggtttagcaggtgcatcagcagcagcaaccttggcggaattaggctataacattaaaagt
ttttgtattcaagattcccctcgtcgcgcccatagtattgcagcccagggaggaattaac
ggagcaaagaattatcctaatgatggtgatacagtttggaggttattttacgacaccatc
aaggggggtgattatcgttcgagagaggcaaatgttcatcgtttagcacagattagtaac
cagattatcgatcaatgcgttgctcaaggtgtgccatttgccagggaatacagtggttta
ctagccaatcgctcatttggtggatcccaagtatcccgtaccttctatgccaaaggacaa
acgggacaacaactgttattaggggcatatagtgctatgtcgcgccaaattgctacgggt
aaaattcaaatgtttccccgacgtgaaatgttggatttagtagttgttgagggcaaagct
aggggtattattgtacgtaacttgattacgggcgcaattgaacgttatgcaggagatgca
gttttattgtgtacaggcggatatagtaatgttttttatctgtctactaatgctcgtaac
tccaatgtaacggctgcttggcgatgtcataaacgcggagctttatttgctaatccttgc
tttactcaaatccatcctacttgtataccagtctcaggagagtatcaatctaaattaact
ttgatgagtgagggtttgcgtaatgatgggcgagtgtgggtatcgaaaatagtaggggat
aagcgtcatcctgctgatattcctgaagatcaaagagattactatttagaaactagatat
cctagctttggtaatcttgttcctcgtgatgtcgcctcacgtaatgctaaacaagttacc
gatgaaggtaggggagtgggagaaactggtttggctgtgtatcttgattttagagatgct
atcaaaaagttagggcaacagataattagcgatcgctatgataatctatttcaaatgtat
gagcggatcactggcgaaaatccctatgaagtgccgatgcgtatatatcctgccgtacac
tacattatgggtggtttgtgggtagattataacttaatgagtacaatagctgggttgcac
gtcttgggggaagcaaatttttcagatcatggagcaaaccgcctgggtgctagtgctttg
atgcagggtttggcggatggttattttattattccttatactttgggtaattatctggca
actcatgatttacccccagttaatattgatcacccagcctttgaattatcggaagcaaca
gttaatagtaatattagtaagctattaaaaatagaaggtaaaaaaactgtaacagagttt
catcgtcagttaggtaaaattatttgggattatgtaggaatgtcgcgtaatcgggctgga
ttagaacaagcgatcgcgttaattcaggatttaagacaggaattttggcaaaatgtaact
atccctcaacagcaagatacttttaataaaaatctggaatttgctggtagagttgccgac
tttttagaattgggtgaattgatggcgcgcgatgctttagctagggaagaatcttgtggg
gcgcatttccgcgaagaatatcaaacatctgaaggagaagcccaacgtaatgatcgagat
tttgcttatgttgcagcttggcaatatcagggtaacgaacaagttcctattttacacaag
gaagctctggaatttgaccatgtggagttaacacagagaagttataagtaa
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