Chondrocystis sp. NIES-4102: NIES4102_37940
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Entry
NIES4102_37940 CDS
T05085
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03030
DNA replication
chon03430
Mismatch repair
chon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES4102_37940
03430 Mismatch repair
NIES4102_37940
03440 Homologous recombination
NIES4102_37940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_37940
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_37940
Enzymes [BR:
chon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES4102_37940
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES4102_37940
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES4102_37940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
NTR
HROB
Motif
Other DBs
NCBI-ProteinID:
BAZ46754
UniProt:
A0A1Z4RWA7
LinkDB
All DBs
Position
complement(4312976..4314313)
Genome browser
AA seq
445 aa
AA seq
DB search
MVKILSRQSLGKQAVYDIGLAQDHNFLLVNGTVAANCFNKSHSTAYAYVSYQTAYLKANY
SVEYMSALLTASSGIQEKVDKYRENAQKMGLTILPPDINNSEEDFMPLDKYNILFGLSAV
KNLGSAAIENILASRRADGKFKSLADFCERVELRIVNRRALETLIYCGAFDQLQPNRRQL
INDIDILTSWAQKRSKEKASGQLNLFDMVSEKASCEDSFDQAPSTPTVEDYPLPEKLRLE
KEYIGFYISEHPLKAVHQAAQILSPISLAELSDNKVKHKVSAVVMLNSVRKIVTKGGDTM
AFVQMEDITGEAEGTIFPKTFALLEPLLQVGKQLIVWGKPQQRNDQYQLIIDDAEAVEEV
KMLMLEMTPDQALDQYKSNYLKIILEQLAAPENQFKIPVIAAIGNGNNRQFIRFGQKFWV
QDEHQAITSLQEAGFTVHCQSLLAR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaattctttctcgtcaatcattaggtaaacaagctgtttatgatataggttta
gctcaagaccataattttttattggttaatggcacagtagcagctaattgttttaataaa
tcccattctaccgcctatgcctacgttagctatcaaaccgcctatcttaaagcaaactat
agtgtagagtatatgtcggcactcctaaccgctagcagtggtattcaggagaaagtagat
aaatatcgggaaaacgctcagaaaatggggttaactatcctacctcctgatattaataat
tcggaagaagattttatgccattagataaatacaatattttatttggtttatccgcagtc
aagaatttaggatctgctgcgatcgagaatatattagctagtcgccgtgctgatggtaaa
tttaaatctcttgcagacttttgtgagcgcgtagaattaagaattgtaaatcgtcgagct
ttagaaactttaatttattgtggtgcttttgatcagttacaacctaatcgccgacagtta
attaatgacattgatattttaacttcctgggcgcaaaaacgcagcaaagaaaaggctagt
ggtcaactaaatttatttgacatggtgagtgagaaagcatcttgcgaggatagtttcgat
caagcacctagcaccccaacagtagaagattatcccctaccagaaaaattacgtttagaa
aaagaatatattggtttttatattagtgaacatcctttaaaagcggttcatcaagcagcc
caaattctttcccctattagtctagctgaattatcagataacaaagtcaagcataaagtt
agtgctgtggtgatgttaaattctgtgagaaaaattgttactaagggcggtgatacgatg
gcttttgtacagatggaagatatcacaggggaagcggaaggaactatctttcctaaaact
tttgctcttttagaaccattattacaagtaggtaaacaattaattgtctggggaaaacct
cagcagcgtaatgatcaatatcaattaattattgatgatgccgaagcagtagaagaagtt
aaaatgcttatgctggaaatgaccccagaccaagctttagaccaatataaaagcaattat
ttaaaaataattttagaacagcttgcagcaccagaaaatcaatttaaaattcctgtaatt
gctgcgatcggtaatggtaataatagacagtttattcgctttgggcaaaagttttgggtt
caagatgaacatcaagcaattacatcactacaagaagctggttttacagtacattgtcaa
tccttattagctcgttaa
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