Chondrocystis sp. NIES-4102: NIES4102_40360
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Entry
NIES4102_40360 CDS
T05085
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES4102_40360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_40360
Enzymes [BR:
chon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NIES4102_40360
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES4102_40360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF7705
Motif
Other DBs
NCBI-ProteinID:
BAZ46990
UniProt:
A0A1Z4RX00
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All DBs
Position
plasmid1:complement(89144..89818)
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AA seq
224 aa
AA seq
DB search
MAQHKFSSPLIGDRSAPVKFKPKLVCHSWAELETHTNNCHACGLHKYRTQVVAGRYSQKQ
AELLIIGEGPGQVEDEDGLAFVGDSGKLLDIMLESVGLESWYTTNVVRCRPPENRSPTKA
ECQSCWGFLQSEIALVKPKAILCLGKVAARTMLNTPTKFEKLLRIQHQYFEYPVWATYHP
AYLLRQPQLSEHSPKWQVWQTLCQIKLYLEGCRLEKGDNSLLNL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacacaaatttagctcgccattgataggcgatcgctctgcaccagttaaattt
aagcctaagctagtctgtcatagctgggcagaattagaaactcatacaaataattgtcat
gcttgtgggctgcataaatatcggactcaagtagtagcggggcggtacagtcagaaacaa
gcagaattattgattattggtgaaggaccaggacaggtagaggatgaggatggtctagct
tttgtaggtgattcgggtaaactgttggacattatgctggagtcggtaggattggagtct
tggtatacaaccaatgtggtacgctgtcgtcctccagaaaatcgcagtcccaccaaagct
gagtgtcaaagttgctggggatttttgcagagtgagattgctttggttaagcccaaggcg
attctttgtctgggtaaagtggcagctagaaccatgttaaataccccaactaagtttgag
aaactattgcggattcagcatcaatattttgagtatccagtgtgggcaacgtatcaccct
gcctatctactccgtcaaccacagttaagcgaacacagtccaaaatggcaagtatggcag
actttgtgtcaaatcaagctgtatttagaaggctgtcgccttgaaaagggcgataactcg
ttattaaatttatag
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