Chondrocystis sp. NIES-4102: NIES4102_40770
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Entry
NIES4102_40770 CDS
T05085
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon03420
Nucleotide excision repair
chon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES4102_40770
03430 Mismatch repair
NIES4102_40770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_40770
Enzymes [BR:
chon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES4102_40770
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES4102_40770
MMR (mismatch excision repair)
Other MMR factors
NIES4102_40770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
NACHT
PhoH
PRMT5
SLFN-g3_helicase
NPHP3_N
TGase_elicitor
Motif
Other DBs
NCBI-ProteinID:
BAZ47031
UniProt:
A0A1Z4RX45
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All DBs
Position
plasmid1:complement(127730..129529)
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AA seq
599 aa
AA seq
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MLDAASADIKAENKSLIYMQPSIYQQKVIDWMSDEQDLSDKVVNSVAGSGKSTLLKLVAD
AIAQSNQDLIEQSLVLVFNRKNKDALVAKLNPRWKNSISTVHSAGYKMLRRYLGVQRLEV
NEHKYRTLAKNLNWFNGTKPNEAKVVSLSNFLKLADFVRQTLSDTSYDALLWLVNHYALD
IQTKYLIEIGEQLQYLFRMGSDWASEAVIDHTDMLWLPIHWQINRSPGFKHFQRVMVDEA
QDMSKLQLEFVLSLTTIQGKMLFVGDPAQSINGFCGADTDSFANIKQRLKAEELILPICY
RCPQTHIELINQLYPEIPIKPRDHAPQGRIEVIEESDLWDRNQESSIKTGDLIVARCTSS
LVELNLKLITRGISCNLVGTSLKQDLLERLEEISSQAGFVYPDFPLFCQKYLEFKRSIYE
QNDHGMMLMMKLQDLIKAIKAIYAHFQQCQSIEELQYCIEQLFGSENNEAVLLSTVHRAK
GMEAKRVYIAEPYLLPLYWDNQKAWQLEQENNLLYVALSRSTCNLYLIGDAPWFTNHSSK
DSQVKESSSDLSKKVDIKELIDNASNEQLDLYLSLINREKGRRIAVQFRGSIEVNNSIS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgttagatgctgctagcgcagatattaaagcagaaaacaaaagcttaatatatatgcaa
ccaagtatctatcaacaaaaagttattgactggatgtctgacgagcaagatctttcagat
aaggtggttaattccgtagcaggttctggtaaaagtactttattaaagttagttgccgat
gcgatcgctcaatcaaatcaagatttaattgaacaaagtttagttttagtattcaatcgc
aaaaataaggacgcactggtagctaaactaaaccctcgctggaaaaattctatttctacc
gttcatagtgctggatacaagatgttaaggcgttatcttggggttcaacgattagaagtt
aacgaacataaataccgtaccttggctaaaaacttaaactggtttaatggcactaaacct
aatgaagctaaagtggtcagtttaagtaactttctcaaattagctgattttgtacgtcag
actttatccgatacctcctatgatgctttactgtggcttgtaaatcattatgctctagac
atccagactaaatatttaattgagattggggaacaacttcagtatctattcagaatgggt
agcgattgggcttcagaggcagtaatcgatcataccgatatgttatggctgccaattcac
tggcaaattaatcgctccccagggtttaagcatttccagcgagtgatggtggatgaagct
caagatatgagtaaacttcagttagaattcgttctttctttaactactattcaaggcaag
atgttgtttgtaggagatcctgcccaatctataaatggattttgtggggctgataccgat
agctttgctaacatcaaacagaggttaaaggctgaagaattgatcctgccaatatgttac
cgctgtccccaaactcatattgaacttatcaatcaactttatcctgagattcccattaag
ccaagagatcatgctcctcaaggtagaatcgaagtgatcgaagaatctgacctttgggat
cgaaatcaagaaagttcaatcaagactggagatttaattgtcgccagatgtactagtagc
ttagtagaactaaatttaaaactgattactcgtggtattagctgtaatttagtgggaact
tctctaaaacaagacttattagaacgactagaagaaatatcttctcaagctggatttgtt
tatccagatttccctttattctgtcagaaatatctagagtttaaacgttctatttacgaa
cagaatgatcatggaatgatgttgatgatgaagttacaagacctgattaaagctattaaa
gctatctacgctcattttcagcaatgccaatcaatagaagaactacaatattgtatcgaa
cagttatttggttcggagaataacgaagctgtactcctttctaccgtccaccgtgccaaa
ggtatggaagctaaaagggtttatattgccgaaccatacctacttcctttgtattgggat
aatcaaaaagcatggcaactagaacaagaaaataatcttctttatgtagccctctcccgt
agcacttgtaacttatatttaataggtgatgcaccttggtttacaaaccatagttcaaaa
gatagtcaggttaaagaatctagttcagatttgagtaaaaaggtcgatatcaaagagcta
attgacaatgccagtaacgaacaattagatttgtatttgtctcttattaatcgggaaaaa
ggcaggagaattgctgtccaatttcgaggttcaattgaagtaaacaattcaattagctaa
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