Chitinophaga horti: MKQ68_02890
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Entry
MKQ68_02890 CDS
T09154
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
chor
Chitinophaga horti
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MKQ68_02890
Enzymes [BR:
chor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MKQ68_02890
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Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
RANK_CRD_2
Motif
Other DBs
NCBI-ProteinID:
UYQ94036
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Position
complement(639476..641344)
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AA seq
622 aa
AA seq
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MKKLLIIPALLACMAPASAQRQMEKLDRGLIAVPADKGYFVSWRLFGTDDPGIGFDVYRS
MESSNAFKKLNKSPITNVTSLLDTTAVPGELYTYQLRQRGTAEGTFRTKKERYLSIPLQT
PAGYAPNDGSVGDLDGDGKYEIVLHQTGRAKDNSQAGITDPPIFQAYTLEGKLLWTINLG
KNIRDGAHYTQFMVYDLDGDGRAEIAMKTADGTIDGKGKVVGDSTKDYRNEKGYILAGPE
YLTIFDGLTGAALATTDYIPARHPSSLNPTTEELKSIWGDGYGNRMDRFLACVAYLDGKR
PSLVMTRGYYTRSVLSAWNWRDGKLTQVWTFDSDDASGKNRAYRGQGNHNLTVADVDNDG
KDEIIFGAMTLDDNGTGLYSTGLGHGDALHVTDLDPSHPGLEVFDIQERFDDAGCSFRDA
RTGEILWKKPSIKAGDDGEGPGRGLALDIDPRYPGYECWVAGAGITGMFDAKGNKIADRT
PACNMGIYWDGDVLSEILNGTDVQKWDYINSKTVSLLDAAKFNCVKNNGTKSNPVLSADI
LGDWREEVIYRTTDNNELRIFSTNIPTDRKFYTLMHDPQYRLSIAWQNVAYNQPPHTGFH
MGEGMPAPPKPNIQLINTKKKK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactactgataataccggctttactggcttgcatggcaccagcatctgcacaa
aggcagatggaaaaactggaccgtggactgatcgccgtgcccgcagacaaaggctatttt
gtcagctggcggttgtttggcacagacgatccgggtatcgggttcgatgtatatcgcagc
atggaatccagcaatgcatttaagaaactgaacaaatcacccattaccaacgtaacgtct
ttgctggatacgaccgccgtgccgggcgagttgtatacttaccagttaagacaacgtggc
accgcggaaggtacatttcgcacgaagaaggagcgttacctttccattccgctgcaaacg
ccagcaggctacgcgccgaacgatggctcggtaggtgacctggatggagatggcaaatac
gagatcgtcctgcatcagacgggccgtgcgaaagataactcacaagccggcattacggac
ccgcctatcttccaggcttacacgctggaaggtaaactgctatggacgatcaatctgggt
aaaaatattcgtgatggtgcacattacacgcagttcatggtgtacgacctcgatggcgac
ggtcgtgcggaaatagccatgaagacagccgacggcacgatcgatggcaaaggcaaggta
gtcggcgattctaccaaagattaccgcaatgaaaaaggttacatcctggccggaccagaa
tacctaaccatcttcgacggccttaccggcgcggctttggcgactacagactacattcct
gcacgccacccatcttccttaaaccctactacggaagaattgaaaagcatttggggagat
ggatatggcaaccgtatggaccgcttcctggcctgtgtggcctacctcgacggtaaacgt
ccgagcctggtgatgacgcgcggttattacacgcgttccgtactctccgcctggaactgg
cgggatggcaaacttacgcaggtgtggacttttgatagcgacgatgccagtggaaagaac
cgtgcgtatcgcggtcagggtaaccacaatcttaccgtggcagatgtagataatgacgga
aaagacgagatcatttttggggccatgacgctcgacgataacggcaccggcctgtattct
accggtcttggtcacggtgatgcgctgcatgtaaccgacctcgatccgtctcaccccggg
ctggaagtattcgacatccaggaacgtttcgacgatgccggctgtagcttccgcgacgcc
cgcaccggcgagatcctctggaaaaaaccaagtattaaagcaggcgatgatggcgaaggc
cccggccgcggactggcgctggacattgatccgcgttacccgggctacgaatgctgggta
gcgggagcaggcattaccgggatgttcgatgcaaaaggcaataagatcgccgatcgcaca
ccggcctgtaacatgggtatttactgggacggcgatgtgttaagcgaaatacttaacggc
accgatgtacagaaatgggattacatcaacagtaaaactgtttccctgctggatgcggcg
aagtttaactgcgttaagaacaacggtacaaaatcaaacccggtattgtccgccgacata
ctcggcgactggcgcgaggaggtgatttatcgtaccacagacaacaacgagttacgcatc
ttctccaccaacattccgaccgacaggaaattctatacgctgatgcatgatccgcaatat
cgcctgagcattgcgtggcagaacgtggcctataaccagccgccgcataccggcttccat
atgggcgagggtatgccggcaccaccgaagccgaacatccagcttatcaacacgaaaaag
aaaaaatag
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