Chitinophaga horti: MKQ68_03280
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Entry
MKQ68_03280 CDS
T09154
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_03280
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_03280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
GerE
HTH_28
HTH_Tnp_ISL3
DUF134
HTH_23
NUMOD1
HTH_40
Rhodanese
HTH_10
ENTH
KxDL
HTH_16
Motif
Other DBs
NCBI-ProteinID:
UYQ94113
UniProt:
A0ABY6J371
LinkDB
All DBs
Position
747432..748034
Genome browser
AA seq
200 aa
AA seq
DB search
MIVQPLHNEPEMLKDMQEGDAAAFTALYRHYSPPIYTVTLRMVKDPGAAQEIIQDIFSDI
WKNREVLEIENLAAYLYRAGQNRVLNFFKKLQHDRQRLEDFRVFAEEHYSHIEEALHYRE
SAEMLRDVLQDLSPKQRQVYELCRIEGRSYKEAAAIMGISSHTVKEYLVEANKRIRAGFG
NNPALVFALLYLAAARPVFF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgatagtacaacccttacataacgaaccggagatgttaaaagacatgcaggaaggtgat
gctgctgcttttaccgctttgtaccgtcattacagtccgcccatctacaccgttacactt
cgtatggtaaaagatcccggtgccgcccaggaaatcatccaggacatcttctccgacatc
tggaaaaaccgcgaagtgttggaaatcgagaatttagccgcctatctctatcgcgccggc
caaaaccgggtacttaacttctttaagaaactccagcacgaccgccagcggcttgaagac
ttccgggtgtttgcggaagaacattactcgcatatcgaagaagccctccattatcgcgaa
agcgccgagatgctgcgtgacgtgttacaggatttgtcgcccaaacaacggcaggtgtac
gaactgtgccgcatcgaaggccgctcgtacaaagaagcggccgctattatgggtatttcc
agccatacagtgaaggaatatctcgtggaagccaacaaacgtatccgcgccggttttggc
aacaatcccgcgctggtattcgctttgctttacctggccgccgcccgcccggtatttttt
taa
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