KEGG   Chitinophaga horti: MKQ68_03280
Entry
MKQ68_03280       CDS       T09154                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor  Chitinophaga horti
Pathway
chor02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MKQ68_03280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chor03021]
    MKQ68_03280
Transcription machinery [BR:chor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKQ68_03280
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF PhyR_sigma-like GerE HTH_28 HTH_Tnp_ISL3 DUF134 HTH_23 NUMOD1 HTH_40 Rhodanese HTH_10 ENTH KxDL HTH_16
Other DBs
NCBI-ProteinID: UYQ94113
UniProt: A0ABY6J371
LinkDB
Position
747432..748034
AA seq 200 aa
MIVQPLHNEPEMLKDMQEGDAAAFTALYRHYSPPIYTVTLRMVKDPGAAQEIIQDIFSDI
WKNREVLEIENLAAYLYRAGQNRVLNFFKKLQHDRQRLEDFRVFAEEHYSHIEEALHYRE
SAEMLRDVLQDLSPKQRQVYELCRIEGRSYKEAAAIMGISSHTVKEYLVEANKRIRAGFG
NNPALVFALLYLAAARPVFF
NT seq 603 nt   +upstreamnt  +downstreamnt
atgatagtacaacccttacataacgaaccggagatgttaaaagacatgcaggaaggtgat
gctgctgcttttaccgctttgtaccgtcattacagtccgcccatctacaccgttacactt
cgtatggtaaaagatcccggtgccgcccaggaaatcatccaggacatcttctccgacatc
tggaaaaaccgcgaagtgttggaaatcgagaatttagccgcctatctctatcgcgccggc
caaaaccgggtacttaacttctttaagaaactccagcacgaccgccagcggcttgaagac
ttccgggtgtttgcggaagaacattactcgcatatcgaagaagccctccattatcgcgaa
agcgccgagatgctgcgtgacgtgttacaggatttgtcgcccaaacaacggcaggtgtac
gaactgtgccgcatcgaaggccgctcgtacaaagaagcggccgctattatgggtatttcc
agccatacagtgaaggaatatctcgtggaagccaacaaacgtatccgcgccggttttggc
aacaatcccgcgctggtattcgctttgctttacctggccgccgcccgcccggtatttttt
taa

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