Chitinophaga horti: MKQ68_04265
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Entry
MKQ68_04265 CDS
T09154
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_04265
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_24
HTH_38
GerE
HTH_20
HTH_11
TnsD
HTH_40
HrcA_DNA-bdg
UPF0122
HTH_Tnp_ISL3
HTH_30
HTH_DeoR
RPA_C
Xre-like-HTH
MarR
Fe_dep_repress
HTH_Crp_2
MarR_2
HTH_AsnC-type
DUF2774
HTH_7
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UYQ94305
LinkDB
All DBs
Position
1001363..1001944
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AA seq
193 aa
AA seq
DB search
MTVVPLVNENALFRQIAAGDEEAFREIYYHYYPKLYGFINSLTKVTATTEEILQETFTRL
WEHRESVAGKGYSAPWLFRVASNLAYDHLKNSASRLRLYERIQREQAAPSSNNVTDHINE
RQHAGLLEEAIRQLPEQRQIIFRLSREEGLSHQEIADRLQISPNTVKNQMVKALKSVRSF
MESASRILLTILW
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagtcccgcttgttaatgagaatgcattatttcggcagatcgctgccggggac
gaagaagcattccgggaaatttattaccactactacccgaaactgtacggatttatcaac
agtctgaccaaagtgaccgccactactgaggaaattctccaggaaacgtttacccgcctt
tgggagcatcgcgaaagtgtggcgggtaaagggtattcggcaccctggttattccgcgtg
gcctccaacttagcttacgaccatctgaaaaacagcgccagccgcttacgcttgtacgag
cgcatccagcgggaacaggctgccccctcatccaataatgtaaccgaccatattaacgaa
aggcagcacgcgggtttgttagaagaagccatccgccaattgcctgagcaacggcaaatc
atcttccgcctgtcgcgggaggagggtttgagccaccaggagattgccgaccggttacag
atttcgcctaataccgtgaaaaaccagatggtaaaggccttaaaatcagtgcgatcgttt
atggaaagcgcctcccgtattttgcttactatcctgtggtga
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