KEGG   Chitinophaga horti: MKQ68_04265
Entry
MKQ68_04265       CDS       T09154                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor  Chitinophaga horti
Pathway
chor02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MKQ68_04265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chor03021]
    MKQ68_04265
Transcription machinery [BR:chor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKQ68_04265
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF HTH_24 HTH_38 GerE HTH_20 HTH_11 TnsD HTH_40 HrcA_DNA-bdg UPF0122 HTH_Tnp_ISL3 HTH_30 HTH_DeoR RPA_C Xre-like-HTH MarR Fe_dep_repress HTH_Crp_2 MarR_2 HTH_AsnC-type DUF2774 HTH_7 HTH_5
Other DBs
NCBI-ProteinID: UYQ94305
LinkDB
Position
1001363..1001944
AA seq 193 aa
MTVVPLVNENALFRQIAAGDEEAFREIYYHYYPKLYGFINSLTKVTATTEEILQETFTRL
WEHRESVAGKGYSAPWLFRVASNLAYDHLKNSASRLRLYERIQREQAAPSSNNVTDHINE
RQHAGLLEEAIRQLPEQRQIIFRLSREEGLSHQEIADRLQISPNTVKNQMVKALKSVRSF
MESASRILLTILW
NT seq 582 nt   +upstreamnt  +downstreamnt
atgacggtagtcccgcttgttaatgagaatgcattatttcggcagatcgctgccggggac
gaagaagcattccgggaaatttattaccactactacccgaaactgtacggatttatcaac
agtctgaccaaagtgaccgccactactgaggaaattctccaggaaacgtttacccgcctt
tgggagcatcgcgaaagtgtggcgggtaaagggtattcggcaccctggttattccgcgtg
gcctccaacttagcttacgaccatctgaaaaacagcgccagccgcttacgcttgtacgag
cgcatccagcgggaacaggctgccccctcatccaataatgtaaccgaccatattaacgaa
aggcagcacgcgggtttgttagaagaagccatccgccaattgcctgagcaacggcaaatc
atcttccgcctgtcgcgggaggagggtttgagccaccaggagattgccgaccggttacag
atttcgcctaataccgtgaaaaaccagatggtaaaggccttaaaatcagtgcgatcgttt
atggaaagcgcctcccgtattttgcttactatcctgtggtga

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