Chitinophaga horti: MKQ68_06280
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Entry
MKQ68_06280 CDS
T09154
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chor
Chitinophaga horti
Pathway
chor03030
DNA replication
chor03430
Mismatch repair
chor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKQ68_06280 (dnaE)
03430 Mismatch repair
MKQ68_06280 (dnaE)
03440 Homologous recombination
MKQ68_06280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chor03032
]
MKQ68_06280 (dnaE)
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_06280 (dnaE)
Enzymes [BR:
chor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKQ68_06280 (dnaE)
DNA replication proteins [BR:
chor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKQ68_06280 (dnaE)
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKQ68_06280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UYQ94696
LinkDB
All DBs
Position
complement(1527534..1531169)
Genome browser
AA seq
1211 aa
AA seq
DB search
MKFSHLHVHTQYSLLDGAADIKSLYKKSIADGMPALAITDHGNMFGAFSFVAEAYNHKLN
PEDPKDKRLKVKPIVGCEFYLVENRHKRAFTREEKDIRYHQVLLAKNDEGYRNLIKLCSL
GYMEGLYGKYPRIDKELILQYHKGLIATTCCLGASVPKTILKKGEDEGEKEFKWWLDIFG
EDFYVEMQRHGIPEQDKVNVLLEKWAHKYNVKIIASNDSHYVDKEDANAHDILLCINTGE
KKATPTMKDFDDDVVMKNRRFAFYNDEFYFKNTAEMTKLFADIPAAIDNTNEIVDKVELL
DLKRDILLPNFPIPPQFFTQDQYLRHLTMEGAHQRYTEMTAEIEERLNFELNVIENMGFA
GYFLIVSDFIKAGRDLGVFIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPERKS
MPDIDTDFDDEGRQKVIDYVVDKYGKNQVAQIITYGTMAAKMSIKDVARVLDLPLQDSNA
LAKLVPDKPGIQLDRIFNAPLEGDKSLQDKEGLMGEDIENVKKLRELIKGEDLQGEVLRE
ACVLEGSVRNTGIHAAGIIIAPQDLSDLIPVSTAKDSDLLVTQFEGSIIESAGVIKMDFL
GLKTLTIIKGALDLIKQNHGITISIDDIPLDDDKTYELYQKGETNGTFQFESPGMQKYLR
ELRPDRFDDLIAMNALYRPGPLEYIPLFIRRKHGLEETVYDLPEMEEYMRDTYGISVYQE
QVMLLSQKLANFSKGDADVLRKAMGKKQKAVLDKMKKQFMDGCKTNGHDLKICDKIWTDW
EAFASYAFNKSHSTCYAFVAYQTAYLKAHYPAEYMASVLNNANNLEKITFFMEECKRMGI
DVLPPDVNESFKGFAVNSAGQIRFGLAGLKGVGEGAVENLLEERTKNGAYTSIWDMIKRV
NQRAVNRKSLEAMAMAGAFDCFPELHRAQYFHKPEGDNSTGLEKIVKFGQQASAGSSGMG
SLFGEMDMPDVVPPKMPPCDHWPLTIKLNNERDITGIYISGHPLDDYKFELKYYNMNTIQ
EVLDYQQFLQAPGEDKKGKERSFRLAIYVTMAQERISRNNKQFGIMAMEDYTGKFEFALW
SEDYLRFINYMKAGICLFVNAAFKPRRFNENEYEFKVQSIQLLQEVKKTHTRQVALVTMP
KFLTPEMVQFLTKNAAENPGKAELYVQLIDRDDNMSIRMHTVNKHIEMNDDLAHYLQKQP
DIDVYIDTINK
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttctcacctgcacgttcatacgcaatactccctgctggacggcgccgcggac
attaaatcgctttacaagaagtcgattgccgacggcatgcccgcattggccattaccgac
catggtaacatgtttggcgcgttctcgttcgttgcagaggcctataatcacaagctgaac
ccggaagatccgaaagataaacgcctgaaggttaaaccgatcgtgggatgtgagttctat
ctcgtggagaaccgccacaagcgcgcttttacccgagaagagaaggacattcgctaccac
caggtattactcgctaaaaacgatgaaggataccgtaacctcatcaaactatgctccctc
gggtacatggaaggcctgtacggtaaatacccgcgtatcgataaagaactcattctccaa
tatcataaaggcctgatcgctacgacgtgctgcctgggcgcctctgtacctaaaacgatc
ctcaaaaaaggggaagatgaaggggaaaaggaatttaaatggtggctggatattttcggc
gaggacttttacgtagagatgcagcgccacggtattccggagcaggataaggtgaatgtg
ctgctggagaaatgggcgcataagtacaatgtgaagatcattgcctccaacgactcgcat
tatgtagataaggaagatgcgaatgcgcatgacatcctgctgtgtattaacaccggcgaa
aagaaggccacgcctacgatgaaggatttcgacgacgatgtggtgatgaagaacaggcgc
ttcgctttctacaacgacgaattttactttaagaacacagccgagatgaccaaactgttc
gcagacatcccggccgcgatcgacaataccaacgagatcgtggataaggtggagctgctg
gacctgaaaagggacattttgctgccgaacttcccgatacctccgcaattctttacgcag
gaccaatacctgcgtcacctcacgatggaaggcgcgcaccagcgttatacggaaatgacg
gccgagatcgaggagcgcctcaacttcgagctgaatgtgatcgagaacatgggatttgcg
ggttacttcctgatcgtgtctgacttcatcaaagcggggcgcgacctgggcgtgtttatt
ggcccgggacgtggatcggcagcgggttcggcggtggcttactgtataggcatcacgaac
atcgacccgatcaaatacaacttgcttttcgaaaggttcctgaacccggaacgtaagtct
atgcccgatattgatacggacttcgatgatgaaggccgtcagaaggtaattgattatgta
gttgataaatatggcaagaaccaggtagcgcagatcattacctacggtacgatggctgcc
aaaatgagtattaaggacgtggcgcgtgtgctggacctgcctttgcaggactccaacgcc
ctggcgaaactggtgcccgataaaccaggtatacagctcgacaggatctttaacgcgccg
ctggaaggtgataagagcctgcaggataaagaaggcctgatgggcgaagacatagagaat
gtgaagaaactgcgggaactgatcaaaggagaagatctgcagggtgaagtgttgcgtgag
gcttgtgtactggaaggatcggtgcgtaacacgggcattcacgcggcgggtatcatcatt
gcgccgcaggacttatcagacctgattcctgtatctaccgctaaagactcggacctgctg
gtaacgcagtttgagggtagtataattgaatcggccggcgtaatcaagatggactttttg
ggtctgaagaccctcaccattatcaagggcgcgctggacctgatcaaacaaaaccacggc
atcactatcagtattgatgatataccgctagatgacgataagacctacgaattgtaccag
aagggcgaaaccaacggtacgttccagtttgagagcccgggcatgcagaagtatttgcgt
gagctgcgtccggacaggttcgatgacctgattgcgatgaacgccttgtaccgtccgggt
ccgttggagtacattccgttgtttatccgccgtaaacacgggttggaggaaacggtgtac
gacctgccggagatggaggagtacatgcgtgacacctacggcatttcggtataccaggaa
caggtaatgcttttgagccagaagctggccaacttctccaagggggatgcggacgtactg
cgtaaggcaatgggtaaaaagcagaaggctgtactggacaaaatgaagaaacagttcatg
gacggttgtaaaaccaacggccatgatttgaagatatgcgataagatctggacagactgg
gaggcgtttgcatcctacgcgttcaacaaatcgcactccacctgctacgctttcgtggcc
taccagacggcgtacctgaaggcccactaccctgccgagtacatggcatccgtactgaat
aacgccaacaacctggagaagatcaccttctttatggaggagtgtaaacgtatgggcatt
gacgtattgccgcccgacgtaaacgagtcgttcaaaggttttgcggtgaacagtgcggga
cagatccgtttcggtctggccggtctgaaaggtgtgggcgaaggtgcggtagaaaacctg
ctggaagaacgtacgaagaacggggcttacacctccatatgggacatgatcaaacgcgtg
aaccagcgtgcggtaaacaggaaatcgctggaggccatggcgatggcgggcgcattcgac
tgtttcccggaattgcatcgtgcgcagtacttccataagccggaaggcgataacagcaca
ggattagagaagatcgtgaagttcgggcagcaggcttctgcgggcagcagcggcatgggc
agtctttttggtgagatggacatgccggacgtggtgccgccaaagatgccgccctgcgat
cactggccgctgaccatcaaactgaataatgaaagagatattaccggtatatacatatcc
ggccacccgctggacgactataagttcgagctgaaatattacaacatgaacacgatacag
gaagtgttggattaccagcaattcctgcaggcgccgggtgaagacaagaaaggtaaggaa
cgctcgttccgcctggcaatctacgtgaccatggcgcaggagcgcatctcccggaacaat
aagcagttcggtatcatggccatggaagattataccggcaaatttgagtttgcgttgtgg
agtgaggactacttacgatttatcaactacatgaaggcaggcatctgtttgttcgtaaac
gccgcttttaaaccgcgccgctttaacgagaacgagtacgagtttaaagtacagagcatt
cagctgttgcaggaagtgaaaaagacacacacccggcaggtggccctggtgaccatgcct
aagttcctgacgccggaaatggtacagttcctgacgaagaatgcagcggaaaaccccggt
aaggccgagttgtatgtgcagctgatcgacagggacgataacatgagtattcgcatgcat
acggtaaacaaacacatcgaaatgaatgacgatttggcgcactacctgcagaaacagccg
gatattgatgtgtatatagatactatcaataaataa
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integrated database retrieval system
