KEGG   Chitinophaga horti: MKQ68_06885
Entry
MKQ68_06885       CDS       T09154                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor  Chitinophaga horti
Pathway
chor02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MKQ68_06885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chor03021]
    MKQ68_06885
Transcription machinery [BR:chor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKQ68_06885
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_40 GerE Sigma70_ECF HTH_23 HTH_24 HTH_ParB HTH_38 HTH_11 UPF0122 Xre-like-HTH HTH_20 HTH_10 HTH_5 HTH_29 SpoIIID Fe_dep_repress MarR MarR_2 RPA_C HTH_31 PF0610-like_N TnsD HTH_Mga Dimerisation2-like_dom DUF1699 HTH_36 HTH_7 HTH_IclR HTH_69
Other DBs
NCBI-ProteinID: UYQ94815
UniProt: A0ABY6J562
LinkDB
Position
complement(1677601..1678191)
AA seq 196 aa
MIHPLERTLFRRISRGEEKAFRQVYDLYFSRLSAFVFKLSKSTHITEEVIQDVFLRLWQS
RAQLADVEQPEAWIFTMARNRCTDLLRSLAASGHFNADLPEQEPAAAYSAEERLSVNELR
QLVQEALEALSIQKQTIFRLSKEEGLSHDEIAERMQLSKSTVKNHLSESLKHIRGHIQKS
DNPELYLVLFLIHYLP
NT seq 591 nt   +upstreamnt  +downstreamnt
atgatacacccactggaacgaacattgttccgccgcatcagccgcggcgaggaaaaagcc
ttccggcaggtgtacgacctatatttctcccggctctcggccttcgtgttcaagctttct
aagtcaacccacatcaccgaagaagtaatacaggacgtgtttttacgcctgtggcagtcg
cgtgcgcagctggcggatgtggaacagcccgaggcctggatatttacgatggcccgtaac
cgttgtaccgacctattgcgctccctggccgcttcggggcactttaacgccgatctgccc
gaacaggagcctgcagcagcgtacagcgcagaagaacggttatccgtaaacgaactgcgg
cagctggtgcaggaagctttggaggcgctatccatacagaaacaaaccattttcaggctg
agtaaagaagagggattaagccatgacgagatagcggaaagaatgcaactctctaaaagc
accgttaagaatcacttatcggaatcattaaaacacattcgcggccatattcagaaaagc
gataacccggagctgtaccttgtactgttcctgatccactacctgccttaa

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