Chitinophaga horti: MKQ68_08100
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Entry
MKQ68_08100 CDS
T09154
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chor
Chitinophaga horti
Pathway
chor03030
DNA replication
chor03430
Mismatch repair
chor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKQ68_08100
03430 Mismatch repair
MKQ68_08100
03440 Homologous recombination
MKQ68_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chor03032
]
MKQ68_08100
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_08100
Enzymes [BR:
chor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKQ68_08100
DNA replication proteins [BR:
chor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKQ68_08100
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKQ68_08100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
SasG_E
Motif
Other DBs
NCBI-ProteinID:
UYQ95055
UniProt:
A0ABY6J5V1
LinkDB
All DBs
Position
2002618..2003982
Genome browser
AA seq
454 aa
AA seq
DB search
MYAIVDIETTGGHASASGITEVAIFISDGIRVVDQYQTLINPGVKIPTYITALTGITNEM
VADAPYFEDVAGEIFALLKDHIFVAHHVNFDYSFLKFHLAHYGYDLNTKKLCTVRLGRKI
FPGFPSYSLGNLCRSLQIPILNRHRAGGDAEATAKLFAMLVEADANGAIAAALKPSSKEH
FLPPNLPVEQVRALPGQPGVYYFHDEKGKVIYVGKAKNISKRVNSHFTGNNAGRQRQEFL
RNIHSISYEATGTELMAFILESLEIKRLWPAYNYSQKRIEARFGFYLFEDQQGYLRLAIE
KRRKHTAPIYSFNLMVDGRNRLKSLVTKFELCPRLCFLQTDPNCVGRAEHTCHGACDKEE
APETYNNRVLEAIQHLQDEQPSYIIMGNGRGVGEQSCILMERGRFYGMGYLTREVQITSI
DGLKDYLTPYPENEYILNLIRQYAVTKGLASLTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaattgtcgatatagaaactacgggagggcacgcgagtgccagcggtataacg
gaagtggctatttttatctcggatggcataagggtggtagatcaataccagaccctgatt
aatcccggcgtaaaaatccctacatatattacggccctcaccggtatcaccaacgaaatg
gtggcggatgcgccttattttgaggatgtggcgggcgagatatttgccctgctaaaagac
catatctttgtcgcacatcacgtcaacttcgattactcgttcctgaaatttcacctggca
cattacggttacgacctcaatacgaagaagttatgtaccgtaaggctgggccgtaaaata
ttccccggtttcccttcgtacagcctgggcaacctttgccgttcgctgcaaattcctatc
cttaaccggcaccgcgccggtggcgatgcggaagcgacggccaaactgttcgccatgttg
gtggaagcggacgcgaacggcgctattgccgctgcgttaaaaccaagctccaaagaacat
tttctgccgcccaacctgccggtggaacaggtgcgcgccttacccggacaaccgggcgtg
tactacttccacgatgaaaaaggaaaggtgatctatgtaggaaaggccaaaaacatcagc
aaacgcgtcaacagccattttacgggcaacaatgcgggcaggcaacgccaggagttcctg
cgtaatattcacagcatcagttacgaggccaccggtaccgagctgatggcgtttatcctc
gaatcgctggagatcaaacgcctgtggcccgcatacaactattcacaaaaacgcatcgag
gcgcgtttcggcttttacctgttcgaagaccagcagggatatctgcgcctggccatcgaa
aagcgccgcaaacacaccgcgccgatatacagcttcaacctgatggtagatggccgcaac
cgcctgaaatcattggtaacaaagttcgaattgtgcccacgtctttgtttcctgcaaacg
gatcctaactgcgtaggccgtgccgaacatacctgccatggcgcctgcgacaaggaagag
gcgccggaaacgtacaacaaccgcgtgctggaagcaatccaacacctgcaggacgagcag
ccctcgtacatcattatgggcaacggccgcggcgtaggcgaacaaagctgcatcctcatg
gagcgcggccgcttctacggcatgggctacctcacacgcgaagtacaaatcaccagcatc
gacggactcaaagactatctcacaccttacccagaaaatgagtacatcctcaatcttatc
cgccaatacgcggtaacaaagggtttagcgagtttaactgcttag
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