Chitinophaga horti: MKQ68_14380
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Entry
MKQ68_14380 CDS
T09154
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
chor
Chitinophaga horti
Pathway
chor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MKQ68_14380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_14380
Enzymes [BR:
chor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MKQ68_14380
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MKQ68_14380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
DpnI
Kindlin_2_N
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
UYQ91276
LinkDB
All DBs
Position
complement(3573480..3574211)
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AA seq
243 aa
AA seq
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MPEGPSIVILKELVESFTGKKVLEVSGNAPVDLDRLVGQKITGFKSWGKHFLICFKKFTV
RVHFMLFGSYSINERRDKVPRMRLTFAKGELSFYACLVKIIDEPLDEVYDWSADVMSEQW
DRRAARAKLKQVPDMMACDALLDQHIFSGSGNIIKNEVLFRIRVQPESRIGALPPKKITE
MLTEVVKYSFDFLHWKKQNTLKKHWLAHTKKICPRCNIPFEKKYAGKTKRRSFFCHNCQE
LYT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggcccctccatcgttatcctgaaagaactggtagaaagtttcactggcaag
aaggtactggaagtatccggaaacgcgccggtagatctcgatcgtctcgttggtcagaaa
atcaccggcttcaaatcctggggcaaacactttctcatctgtttcaaaaaatttacggtg
cgtgtgcactttatgctgttcggctcctacagcattaacgagcggcgtgataaagtgccg
agaatgcggctcacctttgcgaaaggagagttgtcgttctatgcctgcctggttaagatc
atcgacgagccgctggacgaggtgtacgactggagcgccgatgtaatgagcgaacaatgg
gatcgccgcgccgccagggccaaactaaagcaggtacccgacatgatggcctgcgatgcg
ttgctcgaccagcacatcttttcgggatcgggcaacatcatcaaaaacgaagtgttgttc
cgcattcgtgtacagcccgaaagccgcattggtgcccttcctcctaaaaagatcaccgaa
atgctcacagaagtcgtcaaatatagcttcgacttccttcactggaaaaaacaaaacacc
ctcaaaaagcactggctggcgcatacaaagaaaatttgtccccgctgcaacattcccttc
gaaaagaaatatgcgggcaaaaccaaacgccgtagcttcttttgccataactgccaggag
ctgtatacctag
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