Chitinophaga horti: MKQ68_15815
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Entry
MKQ68_15815 CDS
T09154
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chor
Chitinophaga horti
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chor03032
]
MKQ68_15815 (topA)
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_15815 (topA)
Enzymes [BR:
chor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKQ68_15815 (topA)
DNA replication proteins [BR:
chor03032
]
Prokaryotic type
DNA Topoisomerases
MKQ68_15815 (topA)
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKQ68_15815 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UYQ91558
LinkDB
All DBs
Position
3923012..3925366
Genome browser
AA seq
784 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKILGKDFEVTSCFGHIRDLEKDDMGIDIKNNFKPKYIIPEEK
EKVVKDLKKMAKDADEVWLATDEDREGEAISWHLAEVLGLDPDTTKRIVFHEITKPAIEK
AVNQPRLLDMNLVNAQQARRILDRIVGFELSPVLWRKMSMRNSLSAGRVQSVAVRLIVER
EREINAFSTTSSFKLEAFFSAKDISGKSVTFKAEGARYKTVEDAEKFLESCVGAGYSVKD
IQVKPGKKSPAAPFTTSTLQQEASRKLGYSVSKTMLLAQKLYESGKISYMRTDSVNLSET
AMADISKEINGQYGEKYYQARKYKNKNESAQEAHEAIRPTYMENHTVDDSDTRRLYELIW
KRTIASQMSDAELEKTIAKIDISTNHEELTASGEVLKFDGFLKVYREDRDDEDLHEEEEQ
EGVLPPLAVKQVLDLREMKATERFTRPSPRYTEASLVKKLEELGIGRPSTYAPTITTIQK
RSYVEKRDKEGVKREFRILILKSDKIEKTSDAENTGAEKAKLFPTDLGMIVTDFLNQYFD
SVMDYGFTAKIEGEFDDIANGKKVWNKMLNEFYNPFHKDVENTLEKAERVKGERQLGTDA
ESGKPIVARMGRFGPMIQIGSVEDEEKPRFAKLKNTQSIETITMEEAMELFKLPRNLGVF
EGEDVVVNIGRFGPYASHAKQFYSLKKEMDPYTVELEEVAPLIVEKRTAKSERTIKVFEK
EKIQILKGPYGPYIKQGLRNFKIPKERIDAAADITLEEAKAIIEDVKANPPKKKAAAGRK
KKSE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctggttatagtagagtccccggcgaaggctaagactatcgaaaagata
ctgggtaaggacttcgaagttacctcctgcttcggtcacattcgcgacctggagaaggat
gatatgggtattgatatcaaaaataatttcaaacccaaatacatcatcccggaggagaag
gagaaagtggtaaaggacctgaaaaagatggccaaagacgccgacgaggtgtggttagca
acggatgaggaccgtgaaggggaagctatttcctggcacctggccgaggtgttgggcctg
gacccggacacgaccaaacgtattgtgttccatgaaattaccaaaccggccatcgagaaa
gcggtgaaccagccccgcctgctcgatatgaaccttgtaaacgcccagcaggcccgccgt
atcctcgacaggatcgtaggttttgaactgtcgccggtgctttggagaaagatgagcatg
cgtaattcgctctccgcaggccgtgtacaatccgtagccgttcgactgatcgtggagcgc
gaaagagagatcaacgccttctccaccaccagcagctttaaactagaagccttctttagt
gcaaaagatatttccggcaaaagcgtaacgtttaaggccgagggtgcccgttataaaacg
gtggaagatgcggaaaagttcctggaatcatgcgttggcgcaggttactccgtgaaagac
atccaggtaaaaccaggtaaaaaatcgccggccgcaccattcactacttctacccttcaa
caggaagccagccgtaaactgggctacagcgtatctaaaacaatgctgctcgcccaaaag
ctgtacgaaagcggtaagatctcctatatgaggaccgactccgtaaacctgtctgaaacc
gcgatggccgacatcagcaaagagatcaacggccagtacggcgaaaaatactaccaggca
cgtaagtataagaataaaaacgaaagcgcacaggaagcgcacgaagccatccgtcccacc
tacatggaaaaccatacagtggatgacagcgatacgcgccgcctgtatgagctgatctgg
aagcgtaccatcgccagccagatgagcgacgccgaactggaaaaaacaatcgccaagatc
gatatcagcaccaatcatgaagagctgactgccagcggtgaggtgttgaagttcgatggc
ttcctcaaagtgtaccgcgaagaccgcgatgacgaggacctgcacgaagaagaggaacag
gaaggcgtgctgcctccactggccgtaaaacaggtgctggacctgcgcgaaatgaaggcg
accgaaaggtttacacgcccttcaccacgctacacggaggccagtctcgtaaagaaactc
gaggagctcggcatcggccgcccatccacctacgcgcccactatcactacgatccagaag
cgttcgtacgtagagaagcgcgacaaggaaggtgttaaaagagagtttcgtatcttaata
ttgaagtcggacaagatcgaaaagacgagcgacgccgaaaacaccggcgccgaaaaagca
aaactcttcccgaccgatcttggcatgatagttactgacttcttaaaccagtatttcgat
tccgtaatggactatggctttaccgccaaaatcgaaggcgagtttgacgacatcgcaaat
ggtaagaaggtctggaacaaaatgctgaacgagttctataatcctttccataaagacgtg
gaaaacacgctcgaaaaagcggaaagggtgaaaggagaacgtcagttaggtaccgatgcg
gaatccggtaaaccgatcgtggcacgcatgggccgctttggaccaatgatccagatcggt
agcgtggaagatgaagagaagccacgctttgcgaagctgaaaaacacccagagcatcgaa
accattaccatggaagaagccatggagctgtttaaactgccacgcaacctgggcgttttc
gaaggcgaagatgtagtcgtaaatatcggacgcttcggcccctacgcctctcacgccaaa
cagttctactcccttaaaaaggaaatggacccttacaccgtggagctggaagaagtagcc
ccgctgatcgtagagaaacgcaccgctaagtctgaacgtaccatcaaagtattcgaaaaa
gaaaagatacaaatcctgaaaggcccttacggaccgtatattaaacagggattgaggaac
ttcaagataccgaaagaaaggatcgacgccgctgcagacatcaccctggaagaagccaaa
gccattatcgaagatgtaaaggccaatccacccaaaaagaaagctgcggcaggcaggaag
aagaaatcggaataa
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