Chitinophaga horti: MKQ68_15845
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Entry
MKQ68_15845 CDS
T09154
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chor
Chitinophaga horti
Pathway
chor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKQ68_15845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chor03019
]
MKQ68_15845
03016 Transfer RNA biogenesis [BR:
chor03016
]
MKQ68_15845
Enzymes [BR:
chor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MKQ68_15845
Messenger RNA biogenesis [BR:
chor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MKQ68_15845
Transfer RNA biogenesis [BR:
chor03016
]
Prokaryotic type
tRNA degradation factors
MKQ68_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
RNase_II_C_S1
HutF_N
KH_2
KH_Vigilin
Motif
Other DBs
NCBI-ProteinID:
UYQ91564
UniProt:
A0ABY6IW18
LinkDB
All DBs
Position
complement(3929969..3932305)
Genome browser
AA seq
778 aa
AA seq
DB search
MNLTPTSVKFDIGDGRIVTIETGKLARQADGAVTVRLGNAILLATVVASKEPKPGQSFFP
LTVDYNEKFASAGRIPGSFFKREGRLSDYEVLISRLIDRALRPLFPDDYLCEVQVLVTLV
SSDNEVMPDALACLAASAALAVSDVPIQEIISEVRVARIDGQYVINPNRTDLARADMDFI
IGATEKNIMMVEGESKECSEEDMIGAIEAAHAAIRVQVKAQEELRALINAGPKREYTKPY
SNEELNAKITGFAKDKILTVAKSALSKHERSDAFSAIGKELVEFLGEELPDEDKPLVGKY
LHDLEKEVIRNMILDQKVRLDGRALDQVRPLAMETDYLPSPHGSALFTRGETQSLTTVTL
GTPEDELLIESAATSNYVKFILHYNFPPFSTGEVKPMRGPGRREVGHGNLAMRSLRIMMP
GADYAYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPLPKHVSGVAMGLISRSTDGAW
AVLTDILGDEDHLGDMDFKVTGTRDGICGIQMDIKVDGLSMDVMRSALEQARKGRLHILD
AMYEAQPAFRPEPKPQAPRMEKLIIDREYIGAVIGPGGKVIQEIQRETGTTINIEEVGEK
GEVSIFSTQKENLDKALTWIKGIVAVPEVGEVYESTVKSIMPYGAFVEFLPGKQGLLHIS
EVSWKRLETMEGVLSEGEKVKVKLTGTDPKTGKFKLSRRVLMPKPEGYVEREEREDRGER
GDRGDRGDRGPRRDDRGDRGPRRDDRGPRRDDRGGDRGGDRGPRNGQEGQPMKFDDQE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcacacctacttcggttaaatttgacataggtgatggtcgtattgtgaccatt
gaaacgggcaaactggcccgtcaagccgatggtgcggtaacggttcgcctcgggaatgca
attctgctggcgacggtggtggcttccaaagagcctaagcccggccaatcattctttccc
ctgacagtggactataatgagaagtttgcctccgcgggccgtattcctggctcattcttt
aaacgcgaaggccgcctttccgattatgaagtactgatctcccgtttgatcgaccgcgca
ctgcgccccctgttccccgacgattatctctgcgaagtgcaggtactggtaaccctcgta
tcttctgataatgaagtaatgcctgatgcactggcctgtctggctgcatctgctgcactt
gccgtttctgacgtgcccatccaggaaatcatttccgaagtaagggtagcacgcatcgac
ggtcaatatgtaatcaaccctaaccgtactgatctcgctcgtgccgatatggacttcatc
attggcgccaccgaaaagaatatcatgatggtggaaggcgaaagcaaggaatgtagcgaa
gaagatatgatcggcgctattgaagctgctcacgccgctatccgtgtacaggtgaaagca
caggaagagctgcgcgctcttatcaacgccggccctaaacgcgaatacaccaaaccatat
agcaacgaggaactgaacgctaagatcactggttttgcgaaagataaaatcctcaccgtt
gccaaatccgccctcagcaaacacgaacgcagcgatgcattctccgctatcggcaaagaa
ctggtggaattcctgggcgaagaactgcctgacgaagacaaaccactggtaggtaaatac
ctgcacgacctcgagaaggaagtaatccgtaacatgatcctggaccagaaagtacgcctc
gatggccgtgcccttgaccaggtgcgcccactggccatggaaactgattaccttcccagc
ccgcacggttccgcgctgtttacccgtggcgaaacgcaatccctcaccaccgttactttg
ggtacgcctgaagacgagctgctgatcgaaagcgccgctacatctaactatgtgaagttc
atcctgcactataacttccctccattctctaccggtgaagtgaaaccaatgcgtggccct
ggccgtcgcgaggtaggtcacggtaacctggcgatgcgttccctccggatcatgatgcca
ggcgctgactatgcttatactgtaagggtggtatccgacatcctcgagtctaacggttcg
tcttctatggctaccgtatgtgccggttcactggcactgatggacgcaggtgttccttta
ccaaaacacgtatccggtgtggcaatgggcctcatctcccgttctaccgacggtgcatgg
gcagtactgaccgacatccttggtgatgaagatcacctgggtgacatggactttaaagtg
accggtacacgcgacggtatctgcggtatccagatggatattaaagtagatggccttagc
atggacgtgatgcgctcggcgctggagcaggcccgtaaaggtcgtctgcacatcctcgat
gccatgtacgaagcacaacctgctttccgtcctgaacctaaaccacaggctccacgcatg
gagaaactgatcatcgatcgcgagtacatcggcgccgttatcggacccggtggtaaagtg
atccaggagatccagcgcgaaaccggtaccactatcaacatcgaagaagtgggtgaaaaa
ggtgaagtaagcatcttctctacgcagaaagaaaatctcgataaagccctcacctggatc
aaaggcatcgttgccgttcctgaagtgggtgaagtatacgaatctactgttaagtctatc
atgccttacggtgcgttcgtagagttcctgcctggcaaacaaggcttgctgcacatctcc
gaagtttcctggaaacgcctcgaaacaatggaaggtgtactgtctgaaggtgaaaaagtg
aaggtgaaactcaccggcaccgatcctaaaacaggcaagttcaaactgagccgcagagtg
ctgatgccgaaaccagaaggttatgttgaacgcgaagagcgcgaagaccgtggcgaacgc
ggtgatcgtggcgaccgcggcgaccgtggcccaaggagagacgaccgtggtgatcgcggc
ccgagaagagatgatcgtggcccgagaagagacgaccgcggcggtgatcgtggtggcgat
cgcggacctcgcaatggccaggaaggtcagccgatgaaattcgacgaccaggaatag
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