KEGG   Chitinophaga horti: MKQ68_16145
Entry
MKQ68_16145       CDS       T09154                                 
Symbol
priA
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
chor  Chitinophaga horti
Pathway
chor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MKQ68_16145 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chor03400]
    MKQ68_16145 (priA)
Enzymes [BR:chor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MKQ68_16145 (priA)
DNA repair and recombination proteins [BR:chor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MKQ68_16145 (priA)
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Helicase_C Zn_ribbon_PriA Cas3-like_C_2 Zn_ribbon_6 nSTAND3 AAA_30 Trm112p
Other DBs
NCBI-ProteinID: UYQ91622
UniProt: A0ABY6J0E6
LinkDB
Position
complement(4003307..4005751)
AA seq 814 aa
MKFADVIIPLALPRNYTYEVPASMEATLQVGSRVAVQLGKQKKYAGIVKSIHSQAPGAYK
CKPILDQLDKEPVVYPTQTAFWSWLASYYMCTEGEVLNAALPAHLKLSSETVLQYNEAFG
DDYTMLSDDEYMLAEALQIRNELRIDEIQMILDKADVYSVIKQLIEKRVCLVYEELKESY
REKKENFITLNPTYSTDEQMSALFNELGRAPKQMELLLAYLHFSKTQGDVLQSELLKKSG
ASAAQLKGLVEKDILWVEKRTVDRIQMGKGEIKVDFELSTAQAKALLEIYQCFEEKQVTL
LHGVTSSGKTQIYIKLIEDCLQRGKQVLYLLPEIALTAQIIRRLQKHFGGKIGIYHSRFS
NNERVEIWNKVKSGELSIVLGARSSLLLPFRDLGLIILDEEHDSSFKQQEPAPRYHARDA
AIYYAALFKAKVLLGSATPAVESYFNAQQGKYGLVNLGERYGGIEMPAIEVVDVKPEMAA
KKMKGNLTAALEDAIRETISNKKQVILFQNRRGYAPFLLCTTCGWIPHCKQCDVSLTYHR
QADKLHCHYCGTRYPYIYTCAACGSQTLLPKSFGTEKVEDDLHAVFPDARIARMDMDSVR
NKDSHNKMIQQLEQQHIDILVGTQMVVKGLDFENVDLVGILSADSLLSYPDFRVNERAYQ
LMEQVSGRSGRKHGKGRVLIQASNTRHPVLQYVIDHNYRAMYDAEIAERQYFGYPPFVRM
LRITLRHKNEQTVEQAAKVLGNWLRPHLEQQLVGPATPIVSRVRNNYLQEMMIKLPRDTQ
IIARTKDMLREFFIKLQTEKQFRSVVIIPDVDYV
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaagtttgccgacgttataatacccctggcgctgcccaggaattacacctatgaagtg
cccgccagtatggaagctactttgcaggtaggcagccgcgtggccgtacagttgggtaaa
caaaaaaagtacgccggcatcgttaaatccattcacagtcaggccccgggtgcttacaag
tgtaagcccatcctggaccagctggataaggaaccggtggtataccccacgcaaacggcc
ttctggtcgtggctggcgtcgtattacatgtgtaccgaaggcgaagtgctgaacgccgcc
ttgcccgctcacctcaaactgagcagcgaaacagtgttacagtacaatgaggcgttcggt
gacgattacaccatgctttccgacgacgaatacatgctggccgaagccctgcaaatacgc
aacgagctgcggatcgatgagatacagatgatcctggataaggcagatgtgtactcggtg
atcaaacaactgatcgaaaagcgggtgtgtctggtgtacgaggagttgaaagaatcctac
cgcgaaaagaaggaaaactttattacgcttaatccaacatatagtaccgacgagcagatg
tcggccctgttcaacgaactgggacgcgcacccaaacaaatggaactgttactggcgtac
ctgcacttttccaaaacgcagggcgatgtgctgcaaagcgaattgctgaagaagtcgggt
gccagcgctgcccaactaaaagggctggtagagaaggatattctttgggtggagaagcgc
accgtcgaccgcatacagatggggaagggcgagataaaagtagactttgagttaagtacc
gcgcaggctaaggcgttgctggaaatataccagtgctttgaagagaagcaggtaaccttg
ctgcacggcgttacctccagcggtaaaacacagatttatattaaactgatagaggactgc
ctgcagcggggcaaacaagtattatacctgctgccggaaattgccctcaccgcacaaatc
atccgccggttgcagaaacacttcggcggcaagattggcatttaccattcccgcttcagt
aataacgaacgcgtagaaatatggaacaaggttaaaagcggtgaacttagtattgtactg
ggtgcccgttccagcctgctgttgcccttccgcgacctcggacttattatcctggacgag
gaacatgacagctcctttaagcaacaggaaccagcgccgcgttaccatgcgcgggatgcg
gctatttactacgctgctttgtttaaagcgaaagtgttactgggctcggccacgccggcc
gtagaatcgtacttcaacgcgcagcaggggaaatatggtctcgtgaacctcggtgagcga
tacggcggtattgaaatgccggccattgaagtagtggatgtaaagccggaaatggcggcc
aaaaaaatgaagggcaacctgactgccgcactcgaagatgccatccgcgaaacgatctcg
aataagaagcaggtgatccttttccagaacaggcgaggttatgcgccgttcctgttatgc
accacctgcggctggataccgcattgtaaacagtgcgatgtttcgcttacgtatcaccgg
caggcggacaaactgcattgtcattactgcggcacgcgttacccgtacatctacacctgt
gccgcctgcggcagccagacgttgttgcctaaaagttttggtaccgaaaaggtggaagat
gatctgcatgccgtattccccgatgcccgcattgcgcgtatggacatggactcggtgcgc
aataaagacagccacaataagatgatccagcagctggagcagcagcatattgatatattg
gttggtacgcaaatggtggtgaaggggctcgacttcgagaacgtagatctggtaggtata
ttgagtgccgacagcttgttgagttaccccgatttcagggtgaatgaacgcgcgtaccag
ctgatggagcaggtgagtggccgttcgggccgtaagcatggcaaagggcgcgtgctgata
caggcgagtaatacccgccacccggtgttgcaatatgtgattgatcataactaccgcgcc
atgtatgacgcggaaatagccgaaaggcaatattttggttacccgccgttcgtacgcatg
ttgcgcatcacgttgcgtcataaaaacgaacaaacggtggagcaggcggccaaggtgtta
ggcaactggttgcgccctcacctcgagcagcagttggtggggccggctacgccgatcgta
agccgcgtgcgtaacaattacttacaggaaatgatgatcaagctgccccgcgatacgcag
atcattgcgcgtacgaaagacatgctgcgggagtttttcattaagctacaaacagaaaag
cagttccgttcggtggtgattatccccgatgtggattatgtatag

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