KEGG   Chitinophaga horti: MKQ68_16580
Entry
MKQ68_16580       CDS       T09154                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor  Chitinophaga horti
Pathway
chor02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MKQ68_16580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chor03021]
    MKQ68_16580
Transcription machinery [BR:chor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKQ68_16580
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_ECF Sigma70_r2 Sigma70_r4 HTH_23 GerE HTH_28 HTH_10 PhyR_sigma-like HTH_40
Other DBs
NCBI-ProteinID: UYQ91706
UniProt: A0ABY6J005
LinkDB
Position
complement(4107143..4107787)
AA seq 214 aa
MKESINAMSSSHSDHIRELQIQIARYGDEQAFSALFRLLYDRLLRFCVQYTSSHEAGEEI
VSDVFVKVWNRREELMNVDNLEVYLFVAVKNHSLNYLEQYSSLRITPIDSGLAQLSASAD
PEKDMEWKEMQVKLDGEINRLPEQCRRIFKLIKEDGFKYKDVAAILNISPRTVETQLFRA
IRRLNEAVAPLLNTRSRKTNPPIILLLALAQCWV
NT seq 645 nt   +upstreamnt  +downstreamnt
gtgaaagagagtataaatgcgatgagttccagccattcggatcatatcagggaattgcag
attcagattgcacgctatggagatgagcaggccttttcggctttgttcaggctgttatac
gaccggctgctccggttctgcgtgcagtacaccagctcacatgaagcaggagaggagatc
gtgtcggatgtattcgtgaaagtatggaaccgccgcgaagaactgatgaacgtggataac
ctggaagtatacctcttcgtcgccgttaaaaatcactcgcttaattacctcgagcaatat
tcttccctccgcattaccccgatagacagtggcctggcccagctcagcgcctcggctgat
ccggaaaaggatatggagtggaaagaaatgcaggtgaagctggatggggagatcaaccgc
ctgcccgaacagtgccgccgcatatttaaactgatcaaagaagacgggtttaaatataag
gacgtggcagccatcttaaatatttctccacgcacggtagaaacccagttgttccgggcc
atccgccggttgaacgaagccgtggcaccgttactaaatacccgctcccgcaaaacgaat
ccaccaattatactactgctggcactcgcacaatgctgggtataa

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