Chitinophaga horti: MKQ68_16580
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Entry
MKQ68_16580 CDS
T09154
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_16580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_16580
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_16580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
HTH_23
GerE
HTH_28
HTH_10
PhyR_sigma-like
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UYQ91706
UniProt:
A0ABY6J005
LinkDB
All DBs
Position
complement(4107143..4107787)
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AA seq
214 aa
AA seq
DB search
MKESINAMSSSHSDHIRELQIQIARYGDEQAFSALFRLLYDRLLRFCVQYTSSHEAGEEI
VSDVFVKVWNRREELMNVDNLEVYLFVAVKNHSLNYLEQYSSLRITPIDSGLAQLSASAD
PEKDMEWKEMQVKLDGEINRLPEQCRRIFKLIKEDGFKYKDVAAILNISPRTVETQLFRA
IRRLNEAVAPLLNTRSRKTNPPIILLLALAQCWV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagagtataaatgcgatgagttccagccattcggatcatatcagggaattgcag
attcagattgcacgctatggagatgagcaggccttttcggctttgttcaggctgttatac
gaccggctgctccggttctgcgtgcagtacaccagctcacatgaagcaggagaggagatc
gtgtcggatgtattcgtgaaagtatggaaccgccgcgaagaactgatgaacgtggataac
ctggaagtatacctcttcgtcgccgttaaaaatcactcgcttaattacctcgagcaatat
tcttccctccgcattaccccgatagacagtggcctggcccagctcagcgcctcggctgat
ccggaaaaggatatggagtggaaagaaatgcaggtgaagctggatggggagatcaaccgc
ctgcccgaacagtgccgccgcatatttaaactgatcaaagaagacgggtttaaatataag
gacgtggcagccatcttaaatatttctccacgcacggtagaaacccagttgttccgggcc
atccgccggttgaacgaagccgtggcaccgttactaaatacccgctcccgcaaaacgaat
ccaccaattatactactgctggcactcgcacaatgctgggtataa
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