Chitinophaga horti: MKQ68_17295
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Entry
MKQ68_17295 CDS
T09154
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chor
Chitinophaga horti
Pathway
chor03030
DNA replication
chor03430
Mismatch repair
chor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKQ68_17295 (dnaE)
03430 Mismatch repair
MKQ68_17295 (dnaE)
03440 Homologous recombination
MKQ68_17295 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chor03032
]
MKQ68_17295 (dnaE)
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_17295 (dnaE)
Enzymes [BR:
chor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKQ68_17295 (dnaE)
DNA replication proteins [BR:
chor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKQ68_17295 (dnaE)
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKQ68_17295 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
UYQ91844
LinkDB
All DBs
Position
complement(4294315..4297266)
Genome browser
AA seq
983 aa
AA seq
DB search
MRYGTIRDKELVSLAKEWGVTSLALTNINSTTGAWDFVRACRAADIKPVIGMECRNGGTF
CYLLLAREMEGWLSINDFLSAHLHSGAPFPAKPGYMPGVYVVYPWGAQHPASLAEHELIG
VRPRELSRLFRMDVQALRDKLVMLQPVTFATTEQYELHRLLRAVDCNLLITQLPQQEVAA
SDELFVPPHRMLEWYAAYPSIVQNTLRIMDSCDVQFDLKASRNKQTFTGSRQSDKELLRE
KAMEGLGWRYGADHEEARQRVEKELHIIDKMDFNAYFLITWDIICYARNRGFFFVGRGSG
ANSVVAYCLGITNVDPVALGLYFERFLNPHRASPPDFDIDFSWRDRDDIFRYIFKKYGEK
HAALLGTVNTFQTNAVVRELGKVFGLPKYEIDRVLEKPYEVSLGTDNVHRRILHYGQMLE
AYPNHLSIHAGGVLISEAPIHQHCATHMPPKGFSTAQLDMHMAESIHLHKFDILSQRGLG
HIRDTISLVKQNRGVDVDIDDVKGFMEDEHVKQNLRQVNTIGCFYIESPGMRQLLQKLRC
ENYITLVAASSIIRPGVAQAGMMRQYVHNFHHPDKTEYLHPVMKELLAETYGVMVYQEDV
IRVAHRFADLELADADTLRRAMSGKYRGEESFRKIQQQFFENCDRLGRERSVSEEVWRQI
SSFANFSFSKAHSASFAVESYQSLFLKTYFPAEFMVAVINNFGGFYNRELYFRELSKAGV
TLHPPCVNDGDYYTNIKGSDVYTGFIQVDRLEQAWMERVLRCRQADGLFSGLEDFIARTA
PAPEQLEILIRVGAFKFTGESKKSLLWQSSLLLRKQVAEDARLSLFREEPRDWKLPHLSK
HTHEDAFDEIELLGFPLASPFEVLDHQQDVYDTAGMIDRKVGQQVKVLGYLVTLKYIRTS
KGDPMCFGTFLDREMNFVDTVHFPQSLGRYPFQKGGFYVLEGLVTEEFGVITINVQAMKK
IGYFEDRVFEGPSAQRHVAERLL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttacggcacgatcagggataaggagctggtctcgctggcaaaggaatggggtgtt
acgtccctggcacttaccaatatcaacagtacgaccggcgcctgggactttgtgcgtgca
tgccgggcggcggacatcaagccggttataggcatggaatgccgcaacggtggaacgttt
tgttacctcttgctggccagggagatggaaggttggttaagcattaacgactttctttcg
gcgcacctgcatagtggcgcaccatttcccgcgaagcctgggtatatgcccggcgtttac
gtggtgtatccctggggagcacagcatccggcgtcgctggccgagcatgaattgataggt
gtaaggccccgggagctgagtcgtttgtttcggatggatgtgcaggccttgcgtgataaa
ctcgtgatgctgcagccggtcaccttcgctacgacggaacaatatgagctgcatcggttg
ttacgcgcggtagactgcaatttgctaatcacgcaattgccacagcaggaagtggctgca
tcagacgaattgtttgtacctccgcaccgtatgctggagtggtatgcagcctacccgtct
atcgtacaaaatacattgcggatcatggacagttgcgatgtgcagtttgatcttaaggcg
agccgcaataaacagacttttaccggtagcaggcaatcggataaagagctgttgcgggaa
aaggcgatggaaggcctgggttggcgctatggagccgatcatgaagaagcacggcagcgg
gtagaaaaggagttacacatcatcgataagatggattttaatgcctacttcctcatcacc
tgggacatcatctgctacgcgcgtaaccgaggtttctttttcgtaggaagaggaagtggt
gctaactcagtggtggcttattgcctgggcatcaccaatgtcgatccggtagcactggga
ctgtatttcgagcggtttctcaatccgcatcgcgccagtccgcccgattttgacatcgac
ttttcctggcgcgacagggatgatatattccggtacatttttaagaaatacggggagaag
catgccgctttactgggaacggtcaataccttccagaccaatgccgtggtgcgggaatta
gggaaagtgtttggtctgccgaagtatgagatcgaccgcgtactggaaaagccttacgag
gtgtcgttagggaccgacaatgtacatcgccgcattctccattacgggcaaatgctggag
gcttatccgaatcatctcagtattcatgccggcggtgtgttgatcagcgaggcacctatt
caccagcattgcgccacccatatgccgcctaaaggtttcagcaccgcgcagctggatatg
catatggccgagagtattcacctgcacaagttcgatattcttagccagcgtggcctgggg
catatacgcgatacgatttcgctggtgaaacaaaaccgtggggtagatgtggatatcgac
gatgtgaagggatttatggaggatgagcacgtgaaacaaaacctgcggcaggtaaataca
attggttgtttctacatagaatcgccgggcatgcggcagttgttgcagaagctgcgctgc
gaaaattacatcacactggtggcggccagttcaatcattcgtccgggtgtggcgcaggca
ggtatgatgcggcagtatgtgcataattttcatcatccggataaaacggaatacttgcat
ccggtgatgaaagaactgctggcagaaacctatggcgtaatggtttaccaggaagatgtg
atccgtgtagcgcatcgctttgccgacctggaattagccgatgcggatacattgcggaga
gcgatgtcaggcaaataccggggtgaagaaagtttcaggaagatacagcaacagttcttt
gaaaattgtgaccggctgggccgcgaacgcagtgtgagtgaagaagtatggcgacagatt
tccagctttgcgaacttctctttttcgaaagcacattcggcgagttttgcggtggagagt
taccagagtttgttcctgaaaacgtatttcccggcggagttcatggtggccgttatcaat
aacttcggcggcttttataaccgggaactctacttccgggagttatcgaaagcgggtgtt
acgcttcacccgccgtgtgtgaatgacggcgactactacacgaatatcaaagggagtgat
gtgtatacaggcttcatccaggtagaccggctggagcaggcgtggatggaacgggtgttg
cgttgccggcaggcagacgggttgtttagtggcctggaagattttatcgcacgaacggct
ccggctcctgagcagctggaaatccttatccgtgtgggtgccttcaaattcacgggtgaa
agtaaaaagtcgctgctctggcaaagttccctgttgttacgcaagcaagtggcggaagat
gcgcgtttgtccttattccgcgaagagccacgcgactggaagttgccccatttgagcaag
catacgcatgaagatgcgttcgatgaaattgagttgctggggttcccactggcctccccg
tttgaggtgcttgaccatcagcaggacgtttatgatacggcggggatgatcgatcgtaag
gtagggcagcaggtgaaggtgttgggttacctggtgacgttgaagtacatccgtaccagt
aagggcgacccaatgtgtttcggtaccttccttgaccgcgaaatgaattttgtagatacc
gttcacttcccgcaaagcctcggacgttatccttttcagaagggtggcttttatgtgctg
gaggggctggtgacggaggagtttggtgtgattaccatcaacgtgcaggcgatgaagaag
attggttacttcgaagaccgggtgtttgaaggaccatcggcacagcgtcatgtagcggag
cgattattgtag
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