Chitinophaga horti: MKQ68_18685
Help
Entry
MKQ68_18685 CDS
T09154
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_18685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_18685
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_18685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_Tnp_1
Sll1247_C
HTH_23
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UYQ92118
UniProt:
A0ABY6IXL0
LinkDB
All DBs
Position
4659996..4660529
Genome browser
AA seq
177 aa
AA seq
DB search
MHQYQDTDLIQRLKEGDVSAYDALFLKYYKLLCINAYWFLQNEQEAEDLVQGFFIDIWEK
QLYHQFSGDLKGYLHTAVKNRCLNHLKKQQSQAEKQEAYGLLQDSSDAPPEDAGPDYHRK
LQHTLNDMEGQKKVAVHLVYMEGKRYKEAADEMGVSVNSFKTHLKRGLKMLREIMKK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaataccaggatactgatctgatccaacggctcaaagaaggcgacgtttcggcg
tacgatgcattattcctcaaatactataaactactctgtatcaatgcctactggttcctg
caaaatgaacaggaagctgaggatctcgtacagggcttttttatcgacatatgggaaaag
cagctctatcaccagtttagcggcgaccttaagggctacctgcatactgccgtaaaaaac
cgctgcctgaatcaccttaaaaaacagcaatcacaagccgaaaagcaggaagcctacggc
cttttgcaggacagctccgacgctccacctgaagacgccgggccggactaccaccggaaa
ctgcaacacacactgaacgatatggaggggcagaagaaggtggcggtacacctggtatat
atggaaggtaaacgctacaaggaggcggcggatgaaatgggggtaagtgtcaattctttc
aaaacacacctcaagcgcggactgaaaatgttgagggagatcatgaaaaaatag
DBGET
integrated database retrieval system
