KEGG   Chitinophaga horti: MKQ68_19335
Entry
MKQ68_19335       CDS       T09154                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
chor  Chitinophaga horti
Pathway
chor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MKQ68_19335 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chor03400]
    MKQ68_19335 (uvrA)
DNA repair and recombination proteins [BR:chor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MKQ68_19335 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MKQ68_19335 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 RsgA_GTPase nSTAND3 DnaJ_CXXCXGXG AAA_21 AAA_22 AAA_18 Viral_helicase1 cobW MeaB Spb1_C
Other DBs
NCBI-ProteinID: UYQ92243
LinkDB
Position
complement(4811323..4814202)
AA seq 959 aa
MAKQKNSQKAEIAPVLNSDEQIEVYGAREHNLKNLDIRIPKNKLVVITGISGSGKSSLAF
DTIYAEGQRRYMESFSAYARQFIGDMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTIT
EIYDFLRLLYARVGVAYSYNTGKAMTRFSEEEIMEHLFRNSHKKKIVVLAPLVRGRKGHY
RELFEQVRKQGYLKVRVDGEILDLKERMQVDRYKIHDIELVIDRLQVQEDARVRMSQSVQ
KALQMGKGLMFVMDNDSGKTMQYSRQLMCEETGLSYEEPSPNTFSFNSPYGACPRCKGLG
TIYQINMEDVIPDRSKSINDGAIVPLGESRDSFSFKQVQQLARKYKFSLTAPVSSLPEKA
LNLLLFGDENGKLDMDMDYEEDAATTMVSTEYEGVVNMVRRYFNDTSSEHVRTWAEGFMQ
LSACPECNGARLRKESLFFKIDEKNIAEVGAMNLDGMAAWFKDLEKRLDKKQNAIAKDIL
KEIRERTGFLLDVGLNYLTLSRATRTLSGGESQRIRLATQIGSQLMGITYILDEPSIGLH
QRDNMRLIDALRNLKAMGNTVIVVEHDKDIMLHADYLIDIGPGAGKHGGRIVAQGTPKEI
LELDTATAGYLKGIHEVDTPPVRRKGNGKKLELKGASGNNLKNVDLSLPLATFICVTGVS
GSGKSTLINETLYPILSKHAYDSKQVPMPYKSIKGLEHIDKVIEIDQSPIGRTPRSNPAT
YCGFFTDIRTLLAAVPEAKIRGYNAGRFSFNVKGGRCDVCEGAGVRTIEMNFLPDVFVHC
EKCNGRRYNRETLEIRYKGKSISDMLDMTVDEAVEFFQPVPYIYRKIKTLQDVGLGYITL
GQSAVTLSGGEAQRVKLATELSKKDTGKTIYILDEPTTGLHFQDIQLLLGVLNKLVDRGN
TVLVIEHNLDVIKTADYLVDLGPEGGQGGGQILCTGTPEELLKCKESHTARFLKLELKR
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggcaaagcaaaagaatagtcaaaaagcagagatagctccggtgttaaacagcgatgaa
cagatcgaagtttatggtgcccgcgagcataatctaaaaaacctggacatcaggatcccc
aagaataaactggttgttatcaccggtatcagcggcagcggaaaatcatccctcgccttc
gataccatttatgcggaagggcagcgccgttatatggaaagtttttctgcctacgcacgc
cagtttataggcgacatggaacgccccgatgtagataagatcacgggtctttcgccggtt
atttccattgagcagaaaacgaccaacaaaaatccccgctctaccgtaggtactattacc
gagatatacgactttttacgtttgctctacgcccgtgttggcgtggcgtactcttacaat
acaggtaaggccatgacccgcttctccgaagaggaaattatggaacaccttttccgcaac
tcccataagaagaaaatagtggtactggcgccattggtgcgcggccgtaaaggtcactac
cgcgaactgtttgagcaggtgcgtaaacaaggctacctgaaagtgcgggtggatggtgaa
atcctggacctgaaagagcgtatgcaggtggaccgttacaagatacacgacattgagctg
gtgatcgatcgtttgcaggtgcaggaagatgcgcgggtgcgtatgagccagagtgtgcag
aaagcgctgcaaatgggtaaggggctgatgttcgtgatggacaatgactccggcaaaacc
atgcagtacagccgtcagctgatgtgtgaggaaacgggcttgtcgtacgaagaaccgtcg
ccgaatacgttctcgtttaactcgccgtatggtgcctgcccccgttgtaaaggcctgggc
acgatttaccagatcaatatggaagatgtaattcccgatcgttccaaatccatcaacgac
ggcgctattgtgccattaggcgaaagccgcgacagcttctcctttaaacaggtgcagcag
ctggcgcgtaaatataaattctccctcacggctcctgtatcttccctgcccgaaaaagcg
ttgaaccttttgttgttcggtgacgaaaacggtaagctggatatggatatggattatgag
gaagatgcagccaccaccatggtatccaccgaatacgaaggtgtggtgaacatggtaagg
cgttacttcaatgatacctcttccgaacatgtgcgcacctgggccgaaggctttatgcag
cttagcgcctgcccggaatgtaacggggcacgtttgaggaaagaaagtctcttcttcaaa
atagatgaaaaaaatattgccgaagtaggtgcgatgaacctggatggtatggccgcctgg
ttcaaagacctcgaaaagcgactggataaaaagcagaatgccatcgccaaagacattctg
aaggaaatacgcgagcgtaccggctttttgctggacgtgggcctgaattaccttacgctg
agccgcgccactcgtacgctgagcggtggtgaatcgcagcgtattcgcctggcaacgcag
attggctcacagctgatgggcattacgtacatcctggacgagccgagcatcggtttgcac
cagcgcgataacatgcgcctgatcgatgcacttcgcaacctgaaagccatgggtaatacc
gtgatcgtggtggagcatgacaaagacattatgctgcacgccgattacctgatcgatatt
ggtccgggtgcaggtaaacacggcggccgcatcgtagcccagggtacaccgaaagaaatt
ttagaactcgataccgctaccgcgggatacctgaaaggtattcatgaagtagacacgccg
cccgttcgccgcaaaggcaatggtaaaaagctggagctgaaaggcgcaagcggcaacaac
ctcaaaaatgtagacctctccctgccgctggccaccttcatttgtgtgacaggcgtatcc
ggcagtggtaaatctacgttgatcaacgagaccctgtaccctatcctgtcgaagcacgct
tacgacagcaaacaggtaccgatgccttacaagagcattaaagggctggagcatatcgat
aaagtaattgagattgatcagtcgccgattggccgtacgccaagaagtaacccggctacc
tattgcgggttctttaccgacatccgcaccttactggccgccgtgcccgaggcaaagatc
cgtggctacaacgcaggtcgtttctcctttaacgtaaaaggtggtcgctgcgacgtttgt
gaaggtgcgggcgttcgcaccatcgaaatgaactttttgccggatgtgttcgtgcattgt
gaaaaatgtaacggccgccgctacaaccgcgaaactttagagatccgttataagggcaag
tctatttccgacatgctggatatgaccgtggatgaggccgtggagttcttccagccggtg
ccttacatctaccggaaaataaaaaccctccaggatgtgggcctgggttacattaccctg
ggacaaagcgccgttaccctcagtggtggcgaggcgcagcgtgtcaaactggccaccgaa
ctttcaaagaaagataccggtaaaaccatctacatcctcgatgaacctactaccggcctg
cacttccaggacattcagctgttgctgggcgtgttgaacaagctggtagaccgtggaaat
acggtgctggtgatcgaacataacctggatgtgatcaaaacagccgattacctggtagac
ctggggccggaaggcggccagggtggcgggcaaatcctttgcaccggtacgccggaagaa
ttattgaaatgcaaggaaagccataccgccaggtttcttaagctggagttaaagcgttaa

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