KEGG   Chitinophaga horti: MKQ68_21690
Entry
MKQ68_21690       CDS       T09154                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
chor  Chitinophaga horti
Brite
KEGG Orthology (KO) [BR:chor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chor03032]
    MKQ68_21690
   03400 DNA repair and recombination proteins [BR:chor03400]
    MKQ68_21690
Enzymes [BR:chor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MKQ68_21690
DNA replication proteins [BR:chor03032]
 Prokaryotic type
  DNA Topoisomerases
   MKQ68_21690
DNA repair and recombination proteins [BR:chor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MKQ68_21690
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: UYQ92695
LinkDB
Position
complement(5391348..5392433)
AA seq 361 aa
MDKLTTIVTDPVAIAKAVHLRYVSASSKGFTREKKGDGFIYLDKEGNEITDEDTLKRIRG
LVLPPAWQDVWICPYANGHLQATGIDTMGRKQYRYHTSWQKVRNETKYDRLYLFGQQLPR
IRKQITKDLRRKQLDKQKVIAIALRVMEETLIRVGNASYEKLYGSHGLTTLRNQHVKVAG
STAFFKFKGKKGVMHKIELKHAALTRLLKKVRDIPGHELFQYYEGDTIHSLDSGEVNEYL
KNCTAEEFTCKDFRTWAGTVHALNMMAELAPFETLAECKKNIVGIIDGVACKLGNTRAVC
KKYYIHPRLFEMYEAGTITPYITSLTSKRKAAQGALGAEEKCLLTLLKQLLSVRKTSRRA
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggataaacttactaccatcgtaacagaccctgtcgccattgcgaaagcggttcacctg
cggtacgtttccgcatcatcaaaagggtttacccgcgaaaagaaaggcgacgggtttatt
tacctcgataaagagggtaatgagattaccgacgaagatacattgaaacgcatccgcggg
ctggtgttgccgccagcctggcaggatgtgtggatatgcccctatgcgaacgggcatttg
caggccaccggtatcgataccatggggcgaaagcagtaccgttaccataccagctggcaa
aaggtgcgtaacgaaacgaagtacgaccgcctgtaccttttcggccaacagttaccgcgc
atacgaaaacagattaccaaagacctgcgccgtaaacaactggataagcagaaggtgatc
gccattgccctgcgggtgatggaagaaacgcttattcgtgtaggcaatgcctcgtacgaa
aagttatatggctcgcacggccttaccacgttgcgcaaccagcacgtaaaggtggcgggc
agtactgcattcttcaagtttaaaggtaagaaaggtgtgatgcacaagattgaattgaag
catgcagcgcttacccgtttgctgaagaaggtgcgtgatattcccgggcatgaattgttt
caatactatgaaggcgataccattcacagcctggactccggcgaggtgaatgagtatctc
aagaactgcacggccgaggaatttacgtgcaaagatttccgcacatgggccggtacggta
cacgctttaaatatgatggccgaacttgcgccattcgaaacactggccgagtgcaaaaaa
aatattgtgggaattatcgacggtgtggcctgcaaactggggaatacacgcgccgtttgt
aagaaatattacatccacccccgcctgttcgaaatgtatgaagcaggcactatcactcct
tacatcacttcacttacctctaaaaggaaagccgcccagggggctttaggggcggaggaa
aagtgcttacttacgctactaaagcaacttttgtccgtccgtaaaacatcccgcagggcg
gcttag

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