Chitinophaga horti: MKQ68_22340
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Entry
MKQ68_22340 CDS
T09154
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chor
Chitinophaga horti
Pathway
chor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKQ68_22340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chor03019
]
MKQ68_22340 (recQ)
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_22340 (recQ)
Enzymes [BR:
chor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKQ68_22340 (recQ)
Messenger RNA biogenesis [BR:
chor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKQ68_22340 (recQ)
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MKQ68_22340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UYQ92824
LinkDB
All DBs
Position
5520896..5523097
Genome browser
AA seq
733 aa
AA seq
DB search
MAVAKVSLLDALHEHFGFDSFKGNQEKIINSILSGKDTFVIMPTGGGKSLCYQLPALMLP
GVALIVSPLIALMKNQVDLVRSYSSKDNVAHFLNSTLTKAQIKKVRSDLTSGKTKMLYVA
PETLTKQENLDFFRELQISFIAVDEAHCISEWGHDFRPEYRRLKEMIDMISSDLPIIALT
ATATPKVQSDIVKNLVLRTPEIFISSFNRPNLYYEIRSKRKKDQTIKDIVKFIHQHKGKS
GIIYTLNRKTTEELADMLVANGIKAVAYHAGLDSGTRASRQDMFLLEEVEVIVATIAFGM
GIDKPDVRFVIHYNIPKSLENYYQETGRAGRDGLEGICVCFYSHKDVQKLEHLMRDKALS
EREMGAQLINETVAYAESSVCRRKVILHYFGETLEKENCGNCDNCRNPKEKIEVKNRVVI
ALKAIQSLEERFGSEYVVNIITGKTNPQISTFKHDKLDVFGEGKEFDAHFWNSLLRQMML
EGLIEKDIEEYGLLKIMDKGKKFLKKPYSIMVSLNHQFDEEGGEEDDEISGEAQASADPV
LFEMLKELRKKVAKEKNLPPFVIFLETSLEDMATQYPTTVQELEKIQGVSKGKAIRYGKQ
FVDVIAKFVEENDIVKPDDFVMKSVVNKSGLKVFIIQNIDKKVPLETIAKNKELTYSQLL
DEMETIVASGTKLNLDYCLDEELDDYAQDEIMEYFKGCETSSLALAKEELSEDNYTLEQL
KLMRIKFLVVYGN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgcaaaggtaagtttgttggatgcattacacgaacatttcggttttgattcc
ttcaaggggaaccaggaaaagatcataaatagcatcctttcaggtaaagatacattcgta
atcatgcccacgggcggtggcaagtctttgtgctatcaattaccggcactcatgctgccg
ggcgtggcgctgatcgtttcgccgctgattgcgctgatgaaaaaccaggtagacctggtg
cgttcgtacagtagcaaggataatgtggcgcattttctaaactctacattaacaaaggcg
caaattaaaaaggtaagatctgatcttacctccggtaaaacgaaaatgctttacgtagcg
ccggaaacgctcacgaagcaggaaaacctggatttcttccgcgaactccagatttcgttt
attgccgtagatgaagcgcattgtatttcggagtggggacacgacttcaggccggagtac
cgccgtttaaaggaaatgatcgacatgatcagcagcgacctgccgattattgcgctgacc
gctacggcaacgccgaaagtacagagcgatattgtgaagaacctcgtgcttcgtacgccc
gagattttcatttcttcctttaaccgtcccaacctgtactacgaaatccgctccaagcgt
aaaaaggaccagaccatcaaggacatcgttaagtttatccatcaacataaagggaaaagc
ggcattatttatacgcttaaccgcaaaacgacggaagaacttgcggacatgctggtagct
aacggaattaaggccgtggcgtaccatgcggggctcgattcgggtacacgtgcctcaagg
caagacatgttcctgctcgaggaagtggaagtaatcgtcgccacgatcgcctttgggatg
ggcattgacaaaccggacgttcgtttcgttattcactacaacattcccaaaagcctggaa
aactattaccaggaaactggtcgcgctggccgtgacgggttggagggcatttgtgtttgc
ttctattcgcataaggatgtgcagaaactggagcacctgatgcgcgataaagcattgagc
gaaagggagatgggtgcgcagcttattaacgaaacagtcgcttatgcggaaagttccgtt
tgccgccgtaaggtaattctccactatttcggcgaaacgttggaaaaggagaattgtggc
aactgcgataactgccgcaatccgaaggagaaaatcgaagtaaaaaaccgcgtcgtaatt
gcacttaaagcgatccaatcactggaagaacgatttggtagcgaatacgttgtgaatatc
atcaccggtaaaacaaatccgcagatcagcacttttaagcatgacaagctggatgtattc
ggtgaaggcaaagaatttgacgcccacttctggaactcgctgcttcgccaaatgatgctg
gagggattgattgagaaggatatagaagaatatggcctgctcaaaattatggacaaaggc
aaaaaattcctgaaaaagccttactccatcatggtatcgttgaaccaccagttcgatgaa
gagggtggggaagaggacgatgagatttccggcgaagcgcaggcttctgcggatcctgtg
ttattcgagatgctgaaggaactgcgtaaaaaggtagcaaaagaaaagaacctgccgcct
ttcgtgattttcctggaaacatccctcgaggacatggccacgcagtaccccaccacggtt
caggaactggaaaagatccagggcgtgagtaagggcaaagccattcgttacggtaaacag
ttcgtggacgtaatcgccaagtttgtggaggaaaatgatattgtgaagcccgatgacttc
gtgatgaaaagcgtagtaaacaaaagtggtcttaaagtattcattatccagaatatagat
aaaaaagtaccgctcgaaaccatcgccaaaaataaggagttaacgtactcccaattgctg
gatgaaatggaaacgatcgtcgccagtggtactaaactaaacctggattattgcctggac
gaagaactcgatgattacgcacaggacgaaatcatggaatactttaaaggatgcgaaaca
tccagcctcgctttagcaaaagaagaattgtcagaagataactacaccctggaacaattg
aagctcatgcgcatcaagttcctggtggtgtacggcaactaa
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