KEGG   Chitinophaga horti: MKQ68_22705
Entry
MKQ68_22705       CDS       T09154                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
chor  Chitinophaga horti
Pathway
chor03030  DNA replication
chor03410  Base excision repair
chor03420  Nucleotide excision repair
chor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MKQ68_22705 (polA)
   03410 Base excision repair
    MKQ68_22705 (polA)
   03420 Nucleotide excision repair
    MKQ68_22705 (polA)
   03440 Homologous recombination
    MKQ68_22705 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chor03032]
    MKQ68_22705 (polA)
   03400 DNA repair and recombination proteins [BR:chor03400]
    MKQ68_22705 (polA)
Enzymes [BR:chor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MKQ68_22705 (polA)
DNA replication proteins [BR:chor03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MKQ68_22705 (polA)
DNA repair and recombination proteins [BR:chor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MKQ68_22705 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MKQ68_22705 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 VipD-like_C
Other DBs
NCBI-ProteinID: UYQ92895
LinkDB
Position
5608846..5611662
AA seq 938 aa
MSKKLFLLDAMALIYRAYYALIRSPRITSKGRNTNAQFGFTSTLFDLINKEKPTHIAVAF
DTHAPTERHTDFVDYKANREEAPEDLLDALPDIKKIIEGFNIPVLELDGYEADDIIGTVA
WQAAAQGYEVYMVTPDKDYGQLVKDNIFIWKPPYQGNKEEILGPKEICAKWQIKDVHQVI
DILGMMGDAVDNIPGIPGVGEKTAMKLLAEYHSLENVLANADKIGGKMGEKIKAGAESAI
LSKKLATIITNVPVEFHEENYCIKEMQKDVLSEIFTELEFKSLGKRILGEGFNALTSDPS
KPVQQDLFGNAIEGAVKTEAVAEESEGPQFGLQADKNIENTPHEYHLSDTPEKQQELVNI
LLTHAEICFDTETTGTDANNVELVGMSFACKPGEAWYVPVPTGRDQALAVLSIFKPLFDA
MDITFIGQNLKYDMLVLKWYDYEIKGKIFDTMLAHYLIEPEGRRSMDLLSAQYLQYAPVS
IETLIGKKGKNQGNMRDVEIEKIKDYAAEDADITLQLKEKFLPIIDAKEVANVFYDVENP
LVKVLVDMEFEGIAIDHITLSDYSRQLGEDIRRAEESVYEQAGVRFNLGSPKQLGEVLFE
KLQLDPKAKKTRTGQYATGEDVLAKLASKSKIVEDILIYRELSKLKSTYVDALPLMVNPR
TGRVHTSYNQAVAVTGRLSSNNPNLQNIPIRTERGREVRKAFVPRNAGYTLLSADYSQIE
LRIIAAISEDESMISAFQNGIDIHTATAAKVYGVELSDVTSDMRRNAKSVNFGIIYGQSA
FGLSENLGIARSEAKMLIDNYFAQYPAIKEYMEKQVTFAQTTGYVQTQLGRKRWLKDINS
SNAVVRGYAERNAINMPIQGTAADMIKLAMISIHKEMKQQNFKSKMLLQVHDELVFDAHV
DELDRLKPLILDCMKRALPLRVPVEAEIGTGANWLEAH
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgagtaagaaattgtttttattagatgcaatggcgcttatttatcgcgcctattacgca
ttgatccgtagcccgcgtattacgagcaagggccgcaataccaatgcgcaattcggtttt
acttccaccttgttcgacctcattaacaaagaaaaacctacccacattgccgtagctttc
gatacgcatgcgcctaccgaaaggcatacggactttgtcgattataaagccaaccgcgaa
gaagcaccggaagacctgctcgacgcgttgccggacataaaaaaaataatagaaggattt
aatattcccgtgctggaactggacggttacgaagcggacgacattattggtaccgtcgcc
tggcaggcagctgcgcagggttacgaagtatacatggttacgcccgacaaagattatgga
cagctggtgaaagataacatcttcatctggaagccgccttaccagggtaacaaagaagaa
atccttggtccaaaagagatttgcgctaaatggcagattaaagatgtgcaccaggtgatc
gatatcttaggaatgatgggcgatgcggtggacaacattcccggcatacccggcgtgggc
gagaaaacggcgatgaagctgctcgctgaatatcactccctcgaaaatgtactcgccaac
gccgataaaattggcggcaaaatgggtgagaaaattaaagcaggcgcagaaagcgcgatc
ctctcgaagaaactggcaaccatcattaccaatgttccggtggagtttcacgaagaaaac
tactgcatcaaagaaatgcagaaggatgttttgtcggagatttttacagaactggagttt
aagtcccttggcaaacgcatcctcggcgaaggttttaatgccctcaccagcgacccatcg
aagccggtacagcaagacctgttcggcaacgcgatagaaggcgccgtgaaaactgaagcg
gtggctgaagagtcggaaggaccgcaatttggtttgcaggcagataaaaatattgagaat
acgccgcacgaatatcatttatcagatacgcccgaaaagcaacaggagctggtaaacatc
ttactcacccacgcagagatttgcttcgatacggaaaccaccggtaccgatgcgaataat
gtggagttggtgggcatgagcttcgcctgcaaacctggagaggcctggtacgtacccgtg
cccacaggtcgcgatcaggcgctggccgtgctctctatcttcaaaccgctgttcgacgcg
atggatattactttcatcggacagaacctgaagtatgatatgctggtcttaaagtggtat
gactacgagatcaaaggcaaaatattcgataccatgctcgcgcactacctgattgaacca
gaaggtcgccgtagtatggatttgctgagtgcgcaatacctgcagtacgcgccggtctcc
atcgaaacgctcattggaaaaaaaggaaagaaccagggcaacatgcgtgacgtcgaaatc
gagaagattaaagactatgctgcggaagatgccgatatcactttacaactgaaggaaaaa
ttcctgcccatcatcgatgcaaaagaagtagccaatgtgttttatgatgtggaaaacccg
cttgtaaaagtattggttgatatggagtttgaaggtatcgcgatcgatcatattacactg
tccgattattcgcggcaattaggcgaggatattcgccgtgcggaggaaagtgtgtacgaa
caggcgggtgttcggttcaacctcggttcgcccaaacaactgggagaggtgctgttcgaa
aaactgcaactggacccgaaagcgaagaaaacccgtaccggtcagtacgcaacaggtgaa
gacgtactggcgaagctggcgagcaaaagtaagatcgttgaagacatcctgatttaccgc
gagttgagtaaacttaagtcaacttatgtggatgcgttgcctttgatggtaaatccccgc
acaggccgcgtgcatacgtcgtacaaccaggcagttgcggtgacaggccgcctgagctcc
aacaatcccaacctgcaaaacatacccatccgcactgagcgtggccgcgaagtacgtaag
gcttttgtaccacgtaacgcgggatatacattgctctcggcggattattcccagatcgaa
ttgcgcatcatagccgccatcagcgaagatgaaagcatgatctccgctttccagaacggg
atagatattcacactgccacggcggccaaagtttacggcgtagaactgtcggacgtaact
tctgacatgcgccgcaacgccaaaagcgtaaacttcggcatcatttacgggcagagcgct
ttcggcctcagcgaaaacctcggcattgccaggagcgaggctaaaatgttgatcgacaac
tactttgcacagtatccggcgataaaggaatatatggaaaagcaggtaacctttgcgcaa
acgactggttatgtgcaaacgcaactgggccgaaaacgctggctgaaggatattaattcc
tccaacgcggtggtgcgtggttatgcggaacgaaatgcgatcaacatgccgatacaggga
actgccgcggatatgatcaaactggcgatgatcagcatccataaagagatgaagcaacaa
aactttaaatcgaagatgttgctgcaggtacatgacgagttggtgttcgatgcacatgtg
gatgaactggaccgcctgaaacccctgattctcgattgcatgaaacgtgcgttgccattg
cgtgtaccggtagaagccgaaattggtaccggcgctaactggcttgaagcgcattga

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