Chitinophaga horti: MKQ68_22950
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Entry
MKQ68_22950 CDS
T09154
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
chor
Chitinophaga horti
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chor03009
]
MKQ68_22950 (rlmD)
Enzymes [BR:
chor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MKQ68_22950 (rlmD)
Ribosome biogenesis [BR:
chor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MKQ68_22950 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_25
N6_N4_Mtase
TRAM
UPF0020
Met_10
PrmA
PCMT
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
UYQ92943
LinkDB
All DBs
Position
complement(5665677..5667086)
Genome browser
AA seq
469 aa
AA seq
DB search
MRKKNVILENVPVSGYAAEGKALARKDGKVIFIEGGVVPGDVVDVRLGKNKKDWAEGKAV
RFHSLSPDRTTPFCQHFGECGGCKWQMLPYSMQLQHKHQQVEDHLTRIGKIALPEISPIM
GGQLTSHYRNKLEFTFSNKAYLTQAEMDAAAGEEIPRRNAIGFHIPKLFDKVLDIQQCHL
MAEPANLIKNTIRDYAAANDLSFFDIRQQTGWLRNLVLRICTTGEVMANLVIFHEDKEAR
IALLDHLLKAVPAITSLLYTINPKKNDSIFDLEPKVYYGKGYVEEKLEDFVFKIGPKSFF
QTNTYQGERLYQVTREFAGLTGTEVVYDLYCGTGSIGIFVSRQARKVIGIELIKEAIDDA
IINAEQNNVTNATFYAGDVIDIVDDAFFAQHGAPDVIITDPPRAGMHEKLVQKLLEVGAP
KIVYVSCNPATQARDLALLDVMYSVEKVQPVDMFPHTHHIENVILLKKR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaaaagaatgtaattctggaaaacgtcccggtaagtggttatgccgcagaaggt
aaagccctggcccggaaagacggtaaagtaatattcattgaaggtggcgtggtgcccggc
gatgtggtagacgtgcgtcttggtaagaacaagaaggactgggccgaaggtaaagccgtt
cgcttccatagcctgtcgcccgatcgtaccaccccgttctgccagcactttggcgaatgt
ggtggctgtaaatggcagatgttgccgtacagcatgcagctgcaacataaacaccagcag
gtggaagatcatcttacccgtattggtaagatcgccctgccggagatcagcccgattatg
ggcggtcaactcaccagtcattaccggaacaaactggagtttacgttttccaacaaggcc
tatctcacccaggccgaaatggacgccgccgcaggcgaggaaattccccgccgcaacgcg
atcgggttccacattcccaagctgttcgataaggtattggacatccagcaatgccacctg
atggcggagccggcgaatcttattaagaatactattcgtgattacgcagctgccaacgac
ctgtcctttttcgacattcgtcagcaaaccggctggttgcgcaacctcgtattacgcatt
tgcaccaccggcgaggtaatggccaacctggttattttccatgaggataaagaagcgcgc
atcgccctgctggaccatcttttaaaggcagtgcctgccattacgtcgctgttgtatacc
atcaatccaaagaagaacgacagcatttttgacctggagccgaaggtgtattacggcaaa
gggtatgtagaagaaaaactggaggacttcgttttcaagatcggtccgaagtcgtttttc
cagaccaacacctaccagggcgagcggctctaccaggttacacgcgagtttgccggctta
accggcacggaagtagtgtatgacttatactgtggcaccggcagcatcggcatctttgtt
tcccgccaggcacggaaagtaattggtattgagctgatcaaagaagcgattgacgatgcg
atcatcaatgcggaacaaaataacgtgaccaacgctactttttatgccggtgacgtgata
gatatagtggacgatgctttctttgcacaacacggcgcgccagatgtgatcattaccgac
ccgcccagggccggaatgcacgaaaagctggtgcaaaaactgctggaagtgggcgctccc
aaaattgtatatgtgagctgcaacccggctacccaggcccgcgaccttgccctgctggac
gtgatgtacagcgtggaaaaagtgcagcccgtagatatgtttccgcatacgcaccacatc
gaaaacgtgattttactgaagaaaagataa
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