Chitinophaga horti: MKQ68_23035
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Entry
MKQ68_23035 CDS
T09154
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chor
Chitinophaga horti
Pathway
chor03420
Nucleotide excision repair
chor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKQ68_23035
03430 Mismatch repair
MKQ68_23035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chor03400
]
MKQ68_23035
Enzymes [BR:
chor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKQ68_23035
DNA repair and recombination proteins [BR:
chor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKQ68_23035
MMR (mismatch excision repair)
Other MMR factors
MKQ68_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
TPR_1
Motif
Other DBs
NCBI-ProteinID:
UYQ96002
LinkDB
All DBs
Position
complement(5684847..5688014)
Genome browser
AA seq
1055 aa
AA seq
DB search
MTARDNQQYIQRFTEVYARLNERQRDAVDHTEGPVMVIAGPGTGKTQILASRIGKILQDT
DFLPQNILCLTYTDAGTVAMRKRLTDFIGPDAYRVNIHTFHSFCNEVIQDNLSLFDKNTL
DPISDLEKIQMLKKMIDSFSKDNPLKRYRGDVYFDMRNFSWLFSTMKREGWTSAFIKERI
KVYLDSLPFRDEYICKRATKFFKKGEVRTDKIEVEQEKMLRLEAAVEQFDTFQEMMLKAN
RYDFDDMINWVIRVFEQHDALLSDYKERFQYLLVDEYQDTSGTQNRLIQLLIKDEEKPNV
FVVGDDDQSIYRFQGANVENMELFASSFASDLHTVVLTQNYRSVQNVLDASMTLIENNKD
SRLVNQLPGLSKQLIASNDKLAALDIPPEIHRYNTGRDEMAGITLEVEKLLKQGVSPGKI
AIIYKENRYGEELTQYFRLKGIPFYSKRNTNLFEIPFARKILQLLRYLAAELETPNSGDD
ILFEIMHYDFYKIAPIEAALVSIRTNEKSYTDGKTSIRQYIQEWNKARNPTLFSTAPPDE
ILALGAMLEKWLSEAQNLTLQQLFSNIIAEGGILRYVMDSPEKIWLMKVLQAVFDFIKDE
THRDQNMKIQKLMETIDLMEANGIAISLVQVSGNEKGVNLITAHGSKGLEFEYVFVASTN
SHLWEKKRKNSTGFSFPDTVFTTQSTSTDEQELRRLFYVALTRAEKYLYISYPEFRQDGK
PLEPSMFISEILEQHILPNHKIELKEEILFDFEVLQYGKESAPEIQKVDQLFIDALLANF
AMNVTALNNYLNCPLSFFYQNLVRVPSGRSENTEFGSAVHYALEKLFQKMQANHNEFPSK
DEFLRDFRSSMMRNRECFTRESFDRRMEYGTDILGDYYDKYLPSWNTIVSVERNLRNITV
NGVPIKGKIDKLEFDGSEVNVVDYKTGDYQKAIKDYRKFERPNDREPNGGDYWRQAVFYK
ILLDNYKLKNWQVVSTEFDFIEPNKQKEYHKEKVYITPEDITTVTQQITEVWGKIQNKEF
YTGCGKEDCRWCNFVKDNKLQVALHQLVGEEEEEV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgcgacaatcagcaatatatacagcgatttacggaagtttacgcccgtctg
aacgagcggcagcgggatgcggtagatcataccgaaggaccggtaatggtaattgccgga
cccggcacggggaaaacacaaatcctggcttccaggatcggcaagattttacaggacacg
gactttcttccgcaaaacatcctatgcctcacatatacggatgcgggaacggtcgctatg
cggaaacgcctgaccgacttcattggcccggatgcttaccgcgtaaacatccacacgttc
cactcgttttgtaacgaagtgattcaggacaacctttccttatttgataaaaacacgctc
gaccctatttcagacctggaaaaaatccagatgctgaaaaagatgatcgacagtttttcg
aaagacaatccgctgaaacgttatcggggagatgtttacttcgatatgcgcaacttctcc
tggctcttttccaccatgaaaagagaaggctggacatccgccttcataaaggaaaggata
aaggtttacctcgacagcctgccattccgggacgaatatatctgtaaaagggccaccaag
ttcttcaaaaaaggagaagtaaggaccgataagattgaagtggaacaggaaaaaatgctc
cggctggaagcggccgtcgaacaattcgacaccttccaggaaatgatgctgaaagcaaac
aggtacgacttcgatgacatgatcaattgggtaatcagggtgttcgaacagcatgatgcc
ctgttgtctgattataaagagcgttttcaatacttgctggtagacgaataccaggatacg
agcggtactcagaatcggctcatccagttattgattaaggacgaggaaaagccaaacgta
ttcgttgtaggtgatgatgaccaatctatttatcgtttccagggcgccaacgtggagaat
atggaactgttcgcgagcagctttgcttccgatcttcataccgttgtgttaacgcagaac
taccgctcggtacagaacgtgctggacgcatctatgacgctcatagaaaacaataaagat
tcccgcctcgtaaatcagcttcccggcttaagcaaacaactgatcgccagcaatgataaa
ctcgcggcgctcgatattccgcccgagattcaccggtataataccggcagagatgagatg
gccggcattaccctggaagtagagaagttattgaagcaaggagtatcgccgggcaaaatt
gcgatcatttataaagagaaccgttacggcgaggagttaacacaatattttcgattaaag
gggatcccgttttattccaagagaaacacgaatcttttcgagatcccgttcgcgcgaaaa
attcttcaattgcttcgctatctcgcagctgaactggaaacgcccaacagtggtgacgat
attctttttgagatcatgcactacgatttctataagatcgctcccattgaagcagccctt
gtcagcattcgcacgaacgagaagagctatacagatggcaagacctctatccgtcaatat
atacaggaatggaacaaagccaggaacccgaccttgttttcgactgcaccgccagatgaa
atcctggcgcttggagcgatgttggaaaaatggctgagcgaggcacaaaaccttacgttg
cagcagctgttcagcaatatcattgctgaaggcggcatacttcggtatgtgatggattcg
ccggaaaagatctggctgatgaaggtgttacaggccgtattcgactttatcaaagacgaa
acccaccgcgatcagaatatgaaaatccagaagctgatggaaaccatcgacctgatggag
gccaatggaatcgcgatctccctggtgcaggtgtcaggtaatgaaaaaggcgtaaacctg
atcactgcgcatggatcgaaggggctcgagttcgaatatgtatttgtcgccagcaccaat
tctcatctctgggaaaagaaaaggaaaaacagcacagggttttcatttcctgataccgtg
ttcacaacacaatctacctccacagatgaacaggaattacgccgactgttctacgtagca
cttacgcgggcggaaaagtacctctatatatcttatccggagtttcgccaggatggtaaa
ccgctggagcccagcatgttcatctcagaaatactggagcaacatattttacctaaccat
aagatcgaactgaaagaggaaatcttgttcgattttgaagtgctacagtatggtaaggag
tctgcccccgaaatacagaaggtcgaccagctgttcatagacgcgctgctcgccaatttc
gcgatgaacgtaacagcgctcaacaactacctgaactgcccactctccttcttctaccaa
aacctggtgcgggtaccatctggccggtcagaaaatacggaatttggatctgcggtacac
tatgcattggaaaagctgtttcagaagatgcaggcgaaccataacgagtttccctcgaaa
gatgagtttcttcgcgacttcagaagcagcatgatgcgcaaccgcgaatgttttacccgc
gaatcgtttgaccggcggatggagtatggaacggatatactcggcgactactacgacaaa
tatcttccctcctggaataccattgtaagtgtggagcgtaacctccggaatattacagtc
aacggcgtgccgattaagggtaagatagataagctcgaatttgacggcagcgaggtgaac
gtagtggactataaaaccggcgactaccaaaaagccattaaggattaccgcaaattcgaa
cgcccgaacgaccgggagccgaacggaggtgactattggcgacaggcggtgttctacaaa
atactgctggacaactataagctgaagaactggcaggtagtaagtaccgagtttgacttt
atcgaacctaacaagcagaaagaatatcacaaagagaaagtttatatcacgcccgaggat
attaccaccgttactcaacaaataaccgaggtttgggggaaaatccagaataaggagttt
tatacgggctgtggcaaggaagattgtcgctggtgcaacttcgtcaaagacaataaactg
caggtggcattacaccagttggtcggcgaggaggaagaagaggtgtaa
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