Chitinophaga horti: MKQ68_25040
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Entry
MKQ68_25040 CDS
T09154
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
chor
Chitinophaga horti
Pathway
chor02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MKQ68_25040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_25040
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_25040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
UPF0122
KORA
Motif
Other DBs
NCBI-ProteinID:
UYQ93353
UniProt:
A0ABY6J103
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All DBs
Position
6136259..6137128
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AA seq
289 aa
AA seq
DB search
MRQLKITKSITNRESQSLEKYLQEIGKVDLITPEEEVNLAIRIKQGDQRALEKLTKANLR
FVVSVAKQYQNQGLSLSDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKVGLSNKISKAYSQLEQEFEREPSPDELATILEINTEEVEATLGVAARHV
SMDAPFIDGEDNSLLDVLENPNASSADEELDHHDSLRREIERSLSTLTDRQKDVIILYFG
IAVEHPMSLEDIGEKFGLTRERVRQIKDKAITKLRTTSRSKLLRNYLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactaaaaatcaccaaatctatcacgaaccgggagtctcagtctctcgagaag
tatttgcaggagatcggcaaagtagatctgattacgcctgaagaagaggtgaacctggcc
atccgcattaaacagggcgaccagcgcgctttggagaaactcaccaaagctaacctgcgt
ttcgtggtatctgttgccaaacagtatcagaaccagggcttgtcactcagtgatctgatc
aatgaaggtaacctcggtctcatcaaagctgcacagcgtttcgatgaaacccgcggtttc
aaattcatttcctacgctgtttggtggattcgccagtcaattctgcaggctttggccgaa
cagtcgcgcattgtacgtttgccgctgaacaaagttggcttgtctaacaagatcagtaaa
gcatattcccagctggaacaggagtttgaaagggagccgtctcctgacgaactggctacc
atcctggaaatcaatacagaagaagtagaggctacgctgggcgttgctgcccgtcacgta
tcgatggatgcaccttttatcgacggggaagataactccctgctggacgtgctcgaaaat
ccgaacgcatccagtgcggacgaggagctggatcaccatgactccctgcgccgcgagatc
gagcgctcactttctacccttacagacaggcagaaagatgtaattatcctgtatttcggt
atcgcagttgaacatccgatgtcactggaagatatcggcgaaaagtttggtttaacccgt
gaaagggtgcgccagatcaaggataaggcgatcacgaaactgcgtaccacctcccgtagc
aaactgctgagaaactatctcggtagctga
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