Chitinophaga horti: MKQ68_25045
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Entry
MKQ68_25045 CDS
T09154
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
chor
Chitinophaga horti
Pathway
chor02024
Quorum sensing
chor03060
Protein export
chor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MKQ68_25045 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MKQ68_25045 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKQ68_25045 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chor02044
]
MKQ68_25045 (ffh)
Enzymes [BR:
chor01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MKQ68_25045 (ffh)
Secretion system [BR:
chor02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MKQ68_25045 (ffh)
Eukaryotic Sec-SRP protein
MKQ68_25045 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
AAA_22
CLP1_P
AAA_17
AAA_33
AAA_18
AAA_15
CbiA
AAA_24
SRPRB
FtsK_SpoIIIE
AAA_31
APS_kinase
ATP_bind_1
ResIII
6PF2K
MMR_HSR1
KAP_NTPase
AAA_30
ATP_synth_reg
NACHT
nSTAND3
ATPase
AAA_28
AAA_19
ATPase_2
DO-GTPase1
T2SSE
TsaE
AAA_14
NPHP3_N
AAA_16
KTI12
ABC_tran
AAA
Motif
Other DBs
NCBI-ProteinID:
UYQ93354
LinkDB
All DBs
Position
6137270..6138601
Genome browser
AA seq
443 aa
AA seq
DB search
MFESLSERLDSAFKQLKGEGRISEINVATTVKEIRRALVDADVNFKIAKDFTDRVKEKAM
GEKVITAISPGQLMVKIVKDELVELMGNTEVELDLKNNPTVILIAGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVAADIYRPAAIDQLKVLGGQIGVEVYSEPENKNAVQIAENAIKEAKA
KGNNVVIIDTAGRLAVDEVMMTEVANVKAAVNPQEILFVVDSMTGQDAVNTAKAFNERLD
FSGVVLTKLDGDTRGGAALTIKYTVQKPIKFVSMGEKLDTLDVFYPERMAQRILGMGDIT
TLVERAQAQFDEEQAKKLEKKIRQNKFDFDDFKEQLSQIKKMGSLKDLLGMIPGVGKAVK
DLDISDDAFKGIEAMINSMTPAERANPDLIEGSRRKRIAKGAGKDIQDVNQFMKQFEQMR
QMMKMMNKMPGGGKGLKGMRMGR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatcactatcggagaggctggattcagcgtttaagcagcttaaaggcgaggga
cgcatttccgagatcaacgtagcaaccactgtgaaagagatccgccgcgcgctggtggat
gcggatgtgaactttaaaatagccaaggactttaccgacagggtaaaagaaaaagccatg
ggcgaaaaggtaattactgccatttctcccggccagctgatggtgaaaatcgtgaaagat
gaactggtggagctgatgggcaacaccgaagtggagctggacctgaaaaataaccctacc
gtgatcctcatcgcaggtttgcagggttcgggtaaaacaaccttttccggtaaactggcc
aacttcctcaaaacaaagaaaaataagaaaccgttactggtagcggccgacatttaccgt
ccggcggcgatcgatcagctgaaagtgctgggcggccagatcggggtggaagtatattcc
gagcctgaaaataagaacgcggtacagatcgcagaaaatgcgatcaaagaggcgaaagcg
aaaggcaataacgtagtgatcatcgataccgccggccgtttggctgtagatgaggtgatg
atgaccgaggtggccaatgtaaaggcggccgttaacccgcaggaaatcctgttcgttgtg
gactcgatgactggtcaggatgccgtgaacaccgccaaggcgttcaacgaaagactggac
ttctccggtgtggtactgactaaactcgatggcgatacccgcggtggtgcggcgctcacg
atcaagtataccgtgcagaagccgatcaagttcgtgagcatgggggaaaagctggataca
ctggatgtattttatccggaacgtatggcgcagcgtattctcggcatgggtgatattacc
accctcgtagaacgtgcgcaggcacagttcgacgaagaacaggccaaaaagctggagaaa
aagatccgccagaacaaatttgacttcgacgacttcaaagaacagctttcccagatcaaa
aaaatgggtagcctgaaagacctgctgggtatgatcccgggtgtaggtaaagcggtgaag
gacctggacatcagcgacgacgccttcaaaggtattgaagcgatgatcaactctatgacc
ccggccgaacgggctaatcccgacctgatcgaaggcagccgtcgtaaacgtattgcgaaa
ggcgctggtaaagacattcaggacgtaaatcagttcatgaagcagttcgagcagatgcgc
cagatgatgaagatgatgaacaagatgcccggcggcggaaaaggcctgaaaggaatgaga
atgggccgctag
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