Caulobacter henricii: AQ619_03340
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Entry
AQ619_03340 CDS
T04110
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chq
Caulobacter henricii
Pathway
chq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQ619_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chq03019
]
AQ619_03340
Enzymes [BR:
chq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AQ619_03340
Messenger RNA biogenesis [BR:
chq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AQ619_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
HEM4
Motif
Other DBs
NCBI-ProteinID:
ALL12464
UniProt:
A0A0P0NWQ0
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All DBs
Position
complement(697763..699178)
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AA seq
471 aa
AA seq
DB search
MTQFTDLGLAKPLLKALADKGYTTPTPIQAQAIPTVMTGRDLLGIAQTGTGKTAAFALPI
LHRLAEDRKPAPRRGFRCLVLSPTRELATQIADSFRDYGKHMGLTVATVFGGVKYGPQMK
ALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKE
RQNLFFSATMPSEIGKLAGELLKNPAQVSITPQATTVERIEQSLIFIEAQRKRPLLAELL
ADSAVERSIVFTRTKRGADRVAKYLVASGIEAAAIHGDKTQGQRERALAAFKAGEVKALI
ATDIAARGIDVNDVSHVFNFELPNVPESYVHRIGRTARKGKDGIAISFCADDERTLLRDI
QKATRQTIPTFDRRNDKSLAAAAAVADKLAPPEKYVDPRRADPRNNVPAELRRQRNRPSR
NGEQAKGGGQGQARGRNGGGNASAKPAGGDYRGPKRNSAAAPAEKRWNPID
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaatttactgaccttggcctggccaagccgctcctcaaggccctggccgacaag
ggctacaccaccccgaccccgatccaggcccaggccatccccaccgtcatgaccggacgc
gacctgctgggcatcgcccagaccggcaccggcaagacggccgccttcgccctgccgatc
ctgcaccgcctggccgaagacaggaagccggccccgcgccgcggcttccgctgcctcgtc
ctgtccccgacccgcgaactggccacccagatcgccgacagcttccgggattatggcaag
catatgggcctgaccgtcgccaccgtgttcggcggcgtgaagtacggcccgcagatgaag
gccctcgcggccggcgtcgacgtggtcgtggccaccccgggccgcctgatggaccatctg
ggtgaaaaatccgcccacctgaacggtgtcgagatcttcgtgctcgacgaagccgaccag
atgctggacctgggtttcgtggtgccgatccgcaagatcgccagccagctgcccaaggaa
cgccagaacctgttcttctcggccaccatgcctagcgaaatcggcaagctggccggtgaa
ctgctgaagaacccggcccaggtctcaatcacaccccaggccaccacggtcgagcgcatc
gaacagtcgctgatcttcatcgaagcccagcgcaagcgcccgcttctggccgaactactg
gccgacagcgccgtcgaacgctccatcgtcttcacccgcaccaagcgcggcgcagaccgg
gtggccaagtatctggtcgccagcggcatcgaagcggccgccatccacggcgacaagacc
cagggccagcgcgaacgcgccctggccgccttcaaggccggcgaggtcaaggccctgatc
gccaccgacatcgcggcgcgcggcatcgacgtcaacgacgtcagccacgtcttcaatttc
gaactgcccaatgtgccggagtcctatgtccaccgcatcggccggaccgcccgcaagggc
aaggacggcatcgccatcagcttctgcgctgatgacgaacgcaccctgctgcgcgacatc
cagaaggccacccgccagacgatcccgaccttcgatcgtcgcaatgacaagagcctggcc
gctgcggccgctgtggccgacaagctggccccgcctgagaagtacgtcgatccgcgtcgc
gccgacccacgcaacaacgtcccggccgaactgcgccgccagcgcaaccgtccgtcgcgc
aatggcgaacaggccaagggtggcggccagggccaggcccgtggtcgcaacggcggcggc
aacgcctcagccaagccggccggcggcgattatcgcgggcccaagcgcaacagcgcggcg
gcccccgctgaaaagcgctggaacccgatcgactga
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