Caulobacter henricii: AQ619_06600
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Entry
AQ619_06600 CDS
T04110
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
chq
Caulobacter henricii
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chq03019
]
AQ619_06600
Enzymes [BR:
chq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AQ619_06600
Messenger RNA biogenesis [BR:
chq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AQ619_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
Flavi_DEAD
AAA_30
ResIII
HA2_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALL13049
UniProt:
A0A0P0NYA2
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All DBs
Position
1403022..1405466
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AA seq
814 aa
AA seq
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MLPIENVLPALKASLLASHATVLVAPPGAGKTTAVPLALLDESWALGRKIIVLEPRRLAA
RAAAARMADTLGEAVGQTVGFRVRLQSKVSGQTRIEVVTEGVFTRMILDDPGLEGVAAVI
FDEFHERSLDADLGLAFARDVQSVLRDDLRLLVMSATLDGARVSALLGDAPVIESQGRMF
PVDTRYLGRDERLRLEERVGRAVERALAEETGSLLVFLPGQGEIRRVESWLAERLRRPDV
DLAPLYGALDPAVQDRAIAAAPPGRRKVVLATSIAETSLTIEGVRVVIDAGLARVPRYYP
ASGITRLDTVRVSRAAADQRRGRAGRTEPGVCYRLWDEPETRSLPAFARPEILEADLSRL
ALDLARWGVRDAGGLCFMDPPPAAAFAEARALLQRIQALDGQGDLTGHGKALADMPLPPR
IAHMVVRAAASGQALRGAQVAALLTEQGLGGRDIDLRRRLENLGRDRSPRARDAQALADR
WARAAGKPSGATMLDEGLMLAEAYPERVARARGRPGEFQLAGGRGVYMEPTDPLARETWL
AVGELGGGESRDRILLAAAVDEAALREAFADRLTAEDRLETSPGGKVRAKRLLRLGRLVL
EERLIDRPDPALIASALLDQVRSEGLSALRLGDGVQRLRDRVAFLRALDGEVWPDLSEAA
LLGRIEEWLEPLLQGRSSLSALDESTLDGAIRALIPWDAQQKIDAALPARFKAPTGTTVA
IDYAAEAGPRIDIRVQELFGLTEHPSIAGGKIPLVLSLLSPGHKPIQITRDLPGFWKGSW
REVKVEMKGRYPRHVWPDDPAAAAPTTKAKPRGT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgatcgagaatgtcctgcccgcgctgaaggcgtcgctgctcgcttcccatgcg
accgtgctcgtggccccgccgggcgcgggcaagacgaccgccgttcccttggccctgctg
gacgagtcctgggccctggggcggaaaatcatcgttctagagccgcgccggctggccgcc
cgtgccgccgccgcccgcatggccgacactctgggggaagcggtggggcaaaccgtgggc
tttcgcgtccggctgcagtcaaaagtttcgggccagacgcggatcgaggtcgtcaccgag
ggggtcttcacccggatgattctcgacgatccgggtctggagggcgtagccgctgttatc
tttgacgagttccatgagcgcagcctcgacgcggacctgggcctggccttcgcccgggat
gtccagagcgtgctgcgcgatgaccttcggctgctggtcatgtcggccaccctcgacggg
gcgcgggtctcggccttgttgggcgatgctccggtcattgagagccaggggcggatgttc
cccgtcgatacccgctatctcggccgagatgagcgcctgcggctggaagagcgggttggg
cgtgccgtcgagcgcgccctggccgaagagaccggaagcttgctggtcttcctgccgggg
cagggggaaatccgtcgggtggagtcctggctggccgaacgcttgcgccggcccgacgtc
gatcttgccccgctctatggcgctttggatccggccgtacaggaccgcgccattgctgcc
gcaccgccgggacggcgcaaggtggtgctggccacgtcgattgccgagaccagcctgacc
atcgaaggcgtgcgggtggtgattgatgccggtctcgcccgggtgccgcgctattacccc
gccagcggcattacccggctcgacacagtccgggtcagccgcgccgccgccgaccaacgc
cgggggcgggcaggtcggaccgagcccggtgtctgctaccggctgtgggacgagccggag
acccgctcgctgccggcattcgcgcggccggaaattctcgaggctgacctgtcgcgcctg
gccctggacctggcccgctggggcgtgcgcgacgccggaggcctctgcttcatggatccg
ccgccggcagctgcctttgccgaagcgcgggccctgctgcagcggatccaggccctcgac
gggcagggcgatctgacgggccatggcaaggccctggccgacatgcctctgccgccgcgt
atcgcccacatggtcgtccgcgccgccgcctcgggccaggccctgcgcggggcgcaggtt
gctgccctgctgaccgagcaagggctgggtggtcgtgacatcgatctgcgccgtcggctc
gaaaacctcggccgggaccgctcgccccgggctcgggacgcccaggccctggccgaccgc
tgggcccgggcggccggcaagccgtcaggtgccacgatgctggacgagggcctgatgctg
gccgaggcctatcccgagcgcgtggctagggcgcgcggcaggccgggcgagttccagttg
gctggggggcgcggtgtttacatggagcctaccgatcctctggcccgcgagacctggctg
gccgtgggcgaactgggcggcggcgaaagtcgcgaccgcatcttgctggccgctgccgtc
gacgaggcggccctgcgcgaggcctttgccgatcgcctgaccgccgaggaccggctggag
accagccccggcggcaaggtccgcgccaagcggttgttgcgtctggggcgtctcgtcctt
gaggaacggctgattgaccggcctgacccggccctgattgccagtgccctgctggatcag
gtccgttcggaggggctttccgcgctgcggctgggcgatggcgttcagaggctgcgcgac
cgcgtggccttcctgcgtgccctcgatggcgaagtctggccggacctttcggaggccgct
ctgctggggcggatcgaggaatggctggagccgctgctgcagggccgctcgtccctgtct
gcgctggacgagagtacactggacggcgcgatccgagccctgatcccgtgggatgcgcaa
cagaagatagacgccgcccttccggcccgcttcaaggcccctacaggcacgaccgtcgcc
atcgactacgccgccgaggccgggccgcgcatcgacatccgggtacaggagctgtttggc
ctgaccgagcatcccagcatcgccggcggcaagatcccgctggtgctttcgttgctgtcg
ccgggccacaagccaatccagatcacccgcgacctgccgggcttctggaagggttcctgg
cgcgaggtgaaggtcgagatgaagggccgctatccccggcatgtctggccagatgacccg
gcggctgctgcgccaacgacgaaggcgaagcctcgagggacatga
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