Caulobacter henricii: AQ619_09145
Help
Entry
AQ619_09145 CDS
T04110
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
chq
Caulobacter henricii
Pathway
chq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQ619_09145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chq03019
]
AQ619_09145
03009 Ribosome biogenesis [BR:
chq03009
]
AQ619_09145
Enzymes [BR:
chq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AQ619_09145
Messenger RNA biogenesis [BR:
chq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AQ619_09145
Ribosome biogenesis [BR:
chq03009
]
Prokaryotic type
rRNA processing factors
AQ619_09145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ALL13501
UniProt:
A0A0P0NZW5
LinkDB
All DBs
Position
1972150..1974855
Genome browser
AA seq
901 aa
AA seq
DB search
MSKKMLIDAAHAEETRVVVVDGTRVEEFDFESQTRKQLRGNIYLAKVTRVEPSLQAAFIE
YGGNRHGFLAFNEIHPDYYQIPVADREALMRDDSHDDEDDHVSARRDDEDGDHVDDEEDA
VEEELARRKRRLMRKYKIQEVIRRRQIMLVQVVKEERGNKGAALTTYLSLAGRYGVLMPN
TARGGGISRKITTVTDRKRLKSVVQSLDVPQGMGLIIRTAGAKRTKAEIKRDYDYLLRLW
ENIRETTLHSVAPALIYEEEDLVKRAIRDMYDKELEGIWVEGEAGFREARDFMRMLMPSQ
AKKVFHYRDPAPLFVKHRIEDHLAQIYSPVVPLRSGGYLVINQTEALVAIDVNSGKATRE
RNIEATALKTNTEAAEEAARQLRLRDLAGLIVIDFIDMDEGKNNRAVEKVLKDALKDDRA
RIQMGKISGFGLMEISRQRRRTGVLEGTTHVCEHCEGTGRVRSVESSALAALRAVEVEAL
KGSGAITLKVSRAVGIYILNEKRAYLVRLQQTHGLFVTVLVDESLHAAENEIERTELGER
IAIAPPPLSEEDFDDEAYDDEDEADEDEEILDDESLEDEDGDDDASAVRAAARAKPRTEP
ASDDSDRNRKRKRRRRGRRDDVDAGSDDETSEEAEGEDDAEGDRSDFAIEGEDEEARRRR
RRRGRRGGRRGGREDGDRPTDAFVWIRPRVPFGDSAFAWHDPAALDGRGGEPRRPAPEPA
QAAAKPERAERAERSERPERTERSEGRSSRNRGRGRGERDARPAAIQPVADVELPPIPTV
IAEPPPSDIWVELPAPSVDAPKKARRPRSRGRKGDAPVIEDTIEATSDAAAPEVAAPVEP
VVVEPVSVPQVAEPPAVEVQAAPEPTPAVEAVIAPTAPVTPDPAEITTPPAKPRGGWWRR
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagatgcttatcgacgcagcacacgccgaagagacgcgtgtggtcgtcgtg
gacggaacccgggttgaagaattcgatttcgaaagccagacccgcaaacagcttcgcgga
aacatctatctcgccaaggtaacccgcgtcgaacccagcctgcaggcggcgttcatcgag
tatggcggcaatcgccacgggttcctcgccttcaacgagatccatcccgactactaccag
atcccggtcgccgaccgggaagcgctcatgcgcgacgactcgcacgatgacgaggacgac
cacgtctccgcccgtcgcgatgacgaggatggcgatcacgtcgacgacgaggaagacgcc
gtcgaagaagaactggcgcgccgcaagcgccggctgatgcgcaagtacaagatccaggaa
gtgatccgccgccggcagatcatgctggttcaggtcgtcaaggaagagcgcggcaacaag
ggcgcggccctgaccacctacctgtccctggccggccgctatggcgttctgatgcccaat
acggcgcggggcggcggcatcagccgcaagatcacgacggtcactgaccgcaagcgcctc
aagagcgtggtccagagcctcgatgtgccccagggcatgggcctgatcatccgcacggcc
ggtgccaagcgcaccaaggcggaaatcaagcgcgactatgactacctgctgcgcctgtgg
gagaacattcgcgagaccaccctgcattcggtggccccggcgctgatctacgaggaagaa
gacctcgtcaaacgcgccatccgcgacatgtacgacaaggaactggaaggcatctgggtc
gagggtgaagccggcttccgcgaagcgcgcgacttcatgcgcatgctgatgccgagccag
gccaagaaggtgttccactaccgcgatccggcgccgctgttcgtcaagcaccgtatcgaa
gaccatctggcgcagatctattcgccggtcgtgcccctgcgctcaggcggctatctggtc
atcaaccagaccgaagccctggtcgccatcgacgtcaattcgggcaaggcgacgcgcgag
cgcaacatcgaggcgaccgctctcaagaccaataccgaagccgcagaagaagcggcccgc
cagctgcgcctgcgcgacctggccggcctgatcgtcatcgacttcatcgacatggatgaa
ggcaagaacaaccgcgccgtcgagaaggtcctcaaggacgcgctcaaggacgatcgcgcc
cgcattcagatgggcaagatcagcggttttggcctgatggaaatcagccgccagcgccgc
cgcacgggcgtcctggaaggcaccacccacgtctgcgaacactgcgaaggcaccggccgg
gtccgttcggtcgagtccagcgccctggcggccctgcgggccgtcgaggtcgaggccctg
aagggcagcggcgccatcaccctgaaggtctcgcgcgccgtcggcatctatatcctgaac
gaaaagcgcgcctacctggtccgcctgcagcagacccacggtctgttcgtgacggtgctg
gtcgacgagagcctccacgcggccgagaacgagatcgagcgcaccgagctgggcgaacgc
atcgccatcgccccgccgcctctgtcggaggaggacttcgacgacgaggcctatgacgac
gaggatgaagccgacgaggacgaagaaatcctcgatgacgagtcgctcgaggatgaagac
ggcgacgatgacgcctcggccgtccgcgctgcagctcgcgccaagcctcggactgagcct
gccagtgacgacagcgaccgcaatcgcaagcgcaagcggcgccggcgcgggcgtcgtgac
gatgtcgacgccggctcggacgatgaaacctcggaagaggccgaaggcgaagacgacgcc
gaaggggaccgcagcgacttcgccatcgagggtgaggacgaagaagcccgccgccgccgc
cgccgccgcggccgccggggcggtcgtcgcgggggtcgcgaagacggtgatcgtccgacc
gacgccttcgtctggatccgtccgcgtgtcccgttcggcgacagcgcctttgcctggcat
gaccccgcagccctggacggccgtggcggcgagccgcgccgacctgcgccggagccggcc
caggccgcggccaaaccagagcgtgcggaacgggccgaacggtcggaacggccagaacgg
accgaacggtccgaaggccgctcaagccgcaaccgtggtcgcggccgaggcgaacgtgat
gcgcggcctgccgccattcagcctgtggccgatgtcgaactgccgccgattccgaccgtc
atcgccgagcctccgccgagcgacatctgggtcgaactgccggcccccagcgtcgatgcg
ccgaaaaaggcccgccgcccccgctcacgcggtcgcaagggtgacgccccggtgatcgag
gacaccatcgaggccacctccgacgccgctgcgccggaagtggccgcgccagtggagccc
gtggtcgtcgaacctgtttcagtgccccaggtcgctgagccgccggcggtcgaggtgcaa
gccgcgcccgagccgaccccggccgtggaagcggttatcgcgccgacggccccggtcacg
ccggatccggccgaaatcaccacccctccggccaagccgcgtggcggctggtggcgccgg
ggctga
DBGET
integrated database retrieval system
