Caulobacter henricii: AQ619_17200
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Entry
AQ619_17200 CDS
T04110
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
chq
Caulobacter henricii
Pathway
chq02020
Two-component system
chq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQ619_17200
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AQ619_17200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chq03021
]
AQ619_17200
Transcription machinery [BR:
chq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQ619_17200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ALL14961
UniProt:
A0A0P0P325
LinkDB
All DBs
Position
complement(3677899..3679392)
Genome browser
AA seq
497 aa
AA seq
DB search
MALSHRLELRQGQGLVITPQLQQAIKLLQLSNIELDAFVEAELERNPLLQRDEGESEVAS
EAEREPLASDLGVDVVAEGSANHEMDATPDEVSPGERATGDGEQAGEAGGQIDWSRAGGG
GSFDHDGDYEGALTAVPTLSEHLQGQLSQSGLSVSEQLVATILIDGVDEGGYLRLDLVET
ADRLGCDLSLVERVLTVVQGFEPTGVCARDLRECLALQLKDQNRYDPAMAALLDNLELLA
RRDMAGLRKACSVDEEDLREMIGEIRALNPRPGAAYASDTAETLVPDVHVREGLGGMWHV
ELNTDTLPRVLVDQRYHARVAKGARTDQEKTFVSDCMATANWLVKSLDQRAKTILKVSSE
IVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSA
IQSSEGGEAHSAASVRHKIKGLVEAEKAEKDVHSDDAIVEILKAAGVDIARRTVAKYREA
MRIPSSVERRRLIKETA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctcagccacagacttgagctcaggcagggccagggcctcgtcatcaccccgcag
ctgcagcaggcgatcaagctgctgcagctgtcgaacatcgagctcgacgccttcgtcgag
gccgagctggagcgcaatccgctcctgcaacgcgatgagggagagagcgaagtcgcgtcc
gaggcagagcgcgagcccctggccagcgatctgggcgtcgatgtcgtggccgaaggctcg
gccaatcatgaaatggatgccaccccggacgaggtttcgcccggcgagcgcgcgaccggc
gatggtgaacaggccggtgaggccggtggccagatcgactggtcgcgggccggaggcggt
ggctccttcgaccatgacggcgactatgaaggggccctgactgcggttccgaccctatcg
gagcacctgcagggccagctgagccagtccggcctgtcggtcagtgaacagcttgtggcg
acgatcctgatcgatggggtcgatgagggcggctatctgcgcctcgacctggtcgagacg
gccgatcgcctgggctgcgacctctccctggtcgagcgggtcctgaccgtggtccagggc
ttcgagccgaccggcgtttgcgcccgcgacctgcgcgaatgcctggccctgcagctcaag
gaccagaaccgctacgacccggccatggctgctctgctcgacaatctcgagctgctggcc
cgccgggacatggccggtctgcgcaaggcctgcagtgtcgatgaggaagacctgcgggag
atgatcggcgagatccgcgccctgaacccccgacccggcgcggcctatgccagcgacacc
gccgagaccctggtgcccgacgtccatgtccgcgagggcctgggcggcatgtggcatgtg
gagctcaataccgacaccctgccccgcgttctggttgaccagcgctatcacgcccgggtc
gccaagggcgcgcggacggaccaggaaaagaccttcgtgtccgactgcatggccacggcc
aactggctggtcaaaagtctcgatcagcgggccaagaccatcctcaaggtctccagcgag
atcgtccgccagcaggacggcttcctggccttcggtgtcgagcacctgcggccgctgaac
ctgaagaccgtcgctgacgccatcggcatgcacgagagcacggtgagccgggtcacttcc
aacaagtacatcgctacgccgcgcggcgtgttcgaactgaaattcttcttcacctcggcc
atccagtcgtcagagggcggcgaggcccattcggccgccagtgtgcggcacaagatcaag
ggcctggtcgaggccgagaaggccgaaaaggatgtccactccgacgatgccatcgtcgag
atcctcaaggccgccggagtcgacatcgcccggcgcaccgtcgccaagtaccgcgaagcc
atgcggatcccttcgtccgtggagcgccggcgcctgatcaaggaaaccgcctga
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