Chlamydia psittaci RD1: Cpsi_2181
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Entry
Cpsi_2181 CDS
T02153
Symbol
pmp1B
Name
(GenBank) polymorphic outer membrane protein
Organism
chr
Chlamydia psittaci RD1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chlam_PMP
ChlamPMP_M
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CBY16744
LinkDB
All DBs
Position
complement(217447..222840)
Genome browser
AA seq
1797 aa
AA seq
DB search
MKWLSATAVFAAVLPSITVFSEPLSKELNSSYRGSGLSASDSSSKNFTQQTKDDSGTTYT
ITGDVSFTNFTNIPEAKSTRVVEPAPTPPPSPAPDTQSSANSSKQKSESKLSTSIGYESA
FTQPQEQLYHSPDDQNVTSFASHVLDGDQGIFDIGKFTDEKPNSLGFSLSSASSPAVTTS
TTDASTSTPAPKGGGAFYNDKTGPITFITHAGNPGSLSCTLIRMTGQGGAIYSKGPISFD
GLENLTFQDDLSQQAGGALFTDSTLTIRNILNSIAFTNNAARVPIPLIPVLPQPAAESGI
GGLVPPKFKETHLFPRYFSQEAAVKEEGTQTPTFPTYTTETAGNGGAIFAKGAIVISTYK
DMTFRGNSAEFPLIIDVIKEKIDAQKKAAALPSASERVQASAEVAKQQPQEAPPVIKGSG
GAIFGLDTITIRDGSEDTLFILNTATGAGGAIYGDKDISLNNIANLRFQSNSADTRGGAI
YSKGNLTIQDSTILTQFNANNGKTGGGAIYSLGDVTLTNLSQVRFGVNKAGNYDLKITIP
DTEASAAQALPSSVAKQSAPVPIVPPLGKGGGVYVEKALTVSNITSILEFINNQATDHGG
GVYVKGALNCSNSHRIQFTTNTSKKSGGGLYCESDVTFTNLTGKTLFQGNTAEENGGGIC
LADQKSLNLSNLENFCLVDNTTKKSGGGAYIPKALSFTFSNPDTVSSTTPGIVPVFGSAV
ITGNTATENGGGVYTAQASLTNLKSIDIGQNSAKNGAGLCTTNIPSVVAAGIAAQSAEDL
DFKVDYVVTANVTKNTATESGGGVYGGKGKISRLDHLNITGNSAGKSGGGLYFTETLTLE
GIEISNISDNTAKESGGAIYAKALTCTNFPDGLTVSNNKAQVTSTTRSEQRASSVPTAIT
GGAFYAETLTIEKLHGSCAFSGNKVIDDNKTASPEDPADPNIQGGAIYAKTSFTLKNSSG
SLTFSGNSATTKRSTTTGQIAGGAIYAPTVTIQNCSQPINFVGNSALCTPEEQPAAEVLA
KAGTPKATFGGAIAGTTNVTFTGNQALFFKENSADNGSAIGCKNGSNGTVTFSDPVFCSF
EGNIAKNRGAIYADTLSIPQGYMNFSNNSSANDGSAIYFTKKADITAAASIVFLDNTVTL
AQTPAQQRSQVNNLGAAIYGEGNGSTDAELNLTALGGSITFKNNQCAPAQQKVAPSFCSI
TGKVKLTLNAAANQSINFYDAVRTQTVKSSSNSYETLDINKTSNGGNPTKYTGTVLFSSE
YHENKSVIPQKVVLHDGTLILGKNTELNVASFDQKPGSSLVMGPGAVLSTQQKSGSGATG
GIAINNLTIDFSDIVSEDGTASPPALKLGVAPAAAAVGPRARMEKNDLLPRANVSNPDVT
QEKVYLTGTITLIDPAGTFYQNPYLGEDRQIELLKLPDSSKVEISNLTLEGDTKPLKGYI
GSWTLGSGDQNGTLKANWKFEEYRRWIYIPRDNYFYVNSILGSQNSLIAVKQGIVNNMLN
NARFDDAAYNNLWLCGIGSFLQKEQGEESRSFSYHSRGYSLAIDAKPRPEFILGASFSQV
FGHAKSEKAVDNYKHKGSDHSFQGTLYTGKAFYLPYKRTKSPRPILFQGVMTYGYMKHDT
TTYYPSIHERNLGNWEDLGWLFDIRMILDLKEPSQNSTTRFSFYSEAEYTGVRQKQFTEL
DYDPRTFDSFAYRNLSIPLGFVFEGALMQYDILMYNKLSLAYVPVIYRNKPKCNYRVNST
GQTGQVYGVIPTRNTGRAEYSSQIYLGPYWTLYGTYTVEAGMSSLVQMANCGARMIF
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctatcagctacagctgtttttgctgccgtactcccctcgattacagtattt
agtgaacctctttcgaaagaattaaactccagctacagaggatcgggattaagtgcttcg
gattcttcatcaaagaatttcacgcagcaaacaaaagatgacagcggaacaacatacacc
atcactggggacgtctctttcacaaatttcacgaatattcctgaagctaaatcgactcga
gtagtagaacctgctcctactcctcctccttctcctgctcctgatacacagagtagtgcc
aactcaagcaaacaaaagagcgagagtaagctaagcacttcaataggatatgagagtgct
tttacacaacctcaagaacagttgtatcatagcccagatgaccagaatgttacatcattt
gcttcgcatgtgttagatggggatcagggaattttcgatatagggaaattcacagatgaa
aaacctaactctctaggtttctcattatcttcagcatcttctcctgccgttactacctcc
acaacagatgcgtctacttctactcctgctcctaaaggcgggggtgcgttttacaatgac
aaaactggtcctataacattcattacacatgcaggaaacccaggatccttatcctgcacc
ctgattagaatgacaggacaaggtggagctatatactccaaaggtcctatatcttttgat
ggcttagaaaaccttacattccaggatgatctatcccaacaagcgggtggtgctttattt
accgactccacactgacaattaggaatatccttaactctattgcatttacaaataacgcg
gctcgcgttcctattcctctgattcctgttctaccacaaccagcagctgaatctggaatt
ggcggtttagttcctcctaaattcaaggaaacgcatctcttccctagatacttctctcaa
gaagcagcagtaaaagaggaaggaactcaaacacctacattccccacctacacgacagaa
actgcagggaatggaggtgccatttttgctaaaggcgctattgtcatctctacttacaaa
gatatgactttccgaggaaactctgcagaatttcctctgattattgatgtaattaaagaa
aaaattgatgcgcagaaaaaagcagcagcattaccctcagcttctgaaagggttcaagcc
tctgcagaggtggctaaacagcaaccacaagaagctcctcctgtgattaaaggctctgga
ggcgccatttttggcttggataccattaccattcgtgatggctctgaagacaccctcttt
atattaaatactgctaccggagctggaggtgccatttatggagataaggacatctcccta
aataacattgcgaacttaaggttccaaagcaactccgcagatacgcgaggcggagcaatt
tattcaaaagggaatcttacaatacaagattccaccatactcacacaatttaatgcgaac
aacgggaaaacaggtggtggagctatctattccctaggggacgtaaccctaactaacctt
tctcaagtccgttttggtgttaacaaggctggaaactacgatctcaaaattactattcca
gatacagaagcatccgctgcccaagcactgccttcctcagtagcaaaacaatcagctccc
gtacctatcgtacctcctttagggaaaggcggcggtgtctacgtcgagaaagctctcaca
gtttctaatattacttctattttagagtttatcaataaccaagccacagatcatggtgga
ggtgtgtacgtcaaaggagcgttaaattgtagcaattctcatagaatacaatttaccaca
aacacctcaaagaaatctgggggcgggctgtattgcgaaagcgatgtgacctttaccaac
ctcacaggaaaaacactctttcaaggcaacacagcggaagaaaatggtgggggtatctgt
ctagctgaccaaaaatctctaaacttatccaacctagagaacttttgtttagtggacaat
accaccaaaaaaagtggtggtggagcatacattcctaaagcactttcctttaccttctct
aatccggatactgtctcttctacaacacccggtatagttcctgtctttggaagtgctgtg
atcactggcaacacagccacagaaaatggtggcggtgtatacacagctcaagcttcatta
actaaccttaaatcaatcgatatcggtcaaaactctgctaaaaatggagctggactgtgc
accacaaacattccatcagtagttgctgcaggaatagcagcacaatctgctgaagattta
gactttaaggttgattatgtcgttacagccaatgtaacaaaaaacactgctacagaaagt
ggtgggggcgtttatgggggaaaaggaaagatctctcgtctagaccacctaaatattact
ggaaactctgcaggaaaatccggtggtgggctgtatttcacagaaacactgactcttgaa
ggtatagaaatttcaaatatttcagataatactgccaaagaatccggtggagctatctat
gccaaagcacttacctgcactaacttccctgatggactaactgtaagcaataacaaagcg
caagttacctcaactactagatcagaacaacgagcatccagtgttcctactgctatcaca
ggtggagctttctatgctgaaacgttgaccatagaaaagttgcacggaagttgtgccttc
tctgggaacaaagtcattgatgataacaaaacagcaagtcctgaagatcctgctgatcct
aatattcaaggtggggccatctatgctaagacgagcttcacacttaaaaatagctcaggt
agtttaaccttctcaggaaactcggcaacaacaaaacgatctactacaacaggacaaata
gccggtggagcgatttatgctcctactgtgacaattcaaaattgttcacaacccataaac
tttgtaggcaattctgctttatgcactccagaagaacagcctgccgcagaagttcttgca
aaagctggtacgccgaaggcaacctttggtggagccattgcaggaacaaccaacgttaca
tttacaggaaaccaagcactatttttcaaagagaactctgcagataacggctcagctatt
ggttgtaaaaacggttccaatggtacagttacattctctgatcccgtgttctgctccttt
gaagggaatatagcgaaaaaccgtggtgctatctacgcggatacgttatccattcctcaa
ggatacatgaacttctcgaacaatagttctgctaatgacggtagtgcgatttacttcaca
aaaaaggcagacatcacagcagcggcttctattgtgttcctggataacacggtaactcta
gcacaaactccagcacaacaacgctctcaggttaataatctaggtgcagcgatttatggg
gaaggaaatggcagcactgatgcggaattaaatcttacagccctaggcggtagcattaca
tttaaaaataaccaatgcgcacctgcacaacaaaaagtcgcgccttctttctgcagtatt
acaggaaaagttaaactcactcttaacgctgcagcaaatcaatcgattaatttctatgat
gctgtaagaactcaaacagttaagtcttctagtaatagctacgaaactctagatattaat
aaaacatcaaatggaggcaatcctaccaagtacacaggaactgtattattctcttcagaa
taccacgagaataaatcggtcattccccaaaaggttgtcttacatgacggaaccttaatc
ttaggaaaaaatacagagttaaatgtggcgtccttcgatcaaaaacctggatcttcactt
gtgatgggaccaggagccgtactttctactcagcaaaagagtggatcaggggcgactgga
ggcatagcgatcaacaacctcactattgattttagtgatattgtctcagaagatggaaca
gcctcccctcctgctttaaaattaggtgtagctcctgcagcagcagcagtaggacctaga
gctcgtatggaaaagaacgacttgctaccacgagcaaatgtatccaatccagacgtaact
caggaaaaagtctatttaacaggcacaattactcttatcgaccctgcagggactttttac
caaaacccttacttaggtgaagatcgtcagattgagttactcaagctcccagatagtagc
aaagtagagatctctaacctaactctagaaggagataccaaacctctaaagggatatatt
ggctcttggactctaggatcaggtgatcaaaacggaacactcaaagcgaattggaagttt
gaggagtaccgccgctggatctacatccctagagacaactacttctacgtgaactctatc
ctcggttctcaaaactctctcattgctgtaaagcaaggtattgttaacaacatgcttaac
aatgcacgttttgatgatgctgcttacaataacctttggttatgtggtataggctcgttc
ttgcaaaaagaacaaggagaagaatcaagatccttctcctatcatagccgaggttattca
ttggctatcgatgctaaaccacgccctgagtttatccttggagcttcgtttagccaggtg
ttcggtcacgctaaatcagaaaaagctgtagataattacaagcataaaggttctgaccac
tccttccaagggacgttatacaccggcaaagccttttatttgccttataaacgtacgaaa
tcccctcgacctatactgtttcaaggggtaatgacatatggctatatgaagcatgataca
actacctattacccatcaattcatgaacgcaatctcggaaattgggaagatcttggttgg
ttgtttgatatccgtatgattctcgacttaaaagagccttcgcaaaactctacaacaaga
ttttctttctactctgaagcagagtacacaggagtacgtcaaaagcaatttacagagctt
gactatgatcctagaacattcgactccttcgcttatagaaatctttctatacctttaggt
ttcgtgtttgaaggtgcattaatgcaatatgatattcttatgtataacaaattatccctt
gcttatgtacctgtgatttacagaaacaagcctaaatgtaattacagagtgaactctaca
ggacaaactgggcaagtgtatggtgtcattccaaccagaaatactggaagagcggaatat
agctcacaaatatatcttggtccttactggacattatatggtacatacactgtagaagca
ggaatgtcttcattagtccagatggccaactgcggtgcacgtatgatattctaa
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integrated database retrieval system
