Chlamydia psittaci RD1: Cpsi_4221
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Entry
Cpsi_4221 CDS
T02153
Name
(GenBank) putative RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
chr
Chlamydia psittaci RD1
Pathway
chr02020
Two-component system
chr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cpsi_4221
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cpsi_4221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chr03021
]
Cpsi_4221
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
chr02035
]
Cpsi_4221
Transcription machinery [BR:
chr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cpsi_4221
Bacterial motility proteins [BR:
chr02035
]
Flagellar system
Flagellar assembly proteins
Stator
Cpsi_4221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
YceM-like_C
Motif
Other DBs
NCBI-ProteinID:
CBY16951
LinkDB
All DBs
Position
478423..479196
Genome browser
AA seq
257 aa
AA seq
DB search
MKTQNTQNISEIWELYWQTQEIKYRDTLIDFYLHLVKCVAHRLISGMPSHVKTEDLYASG
VEGLVRAVERFNPEKSRRFEGYALFLIKAAIIDDLRKQDWVPRSVHQKANKLADAMDALR
LSLGREPTDGDLCEYFQISQQELSGWFASARPALIISLNEERPSLSDGESGVALEERIAD
ERAETGYDIVDKKEFSSFLASAIEGLEEKERKVMALYYYEELVLKEIGKILGVSESRVSQ
IHSKALIKLRAALSAFL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacacaaaatacgcagaacatttctgagatttgggaactttattggcagactcaa
gaaatcaagtatcgagatactctgattgatttttacctgcacttagttaagtgtgtggct
caccgcctaatttcaggtatgccttcccatgtaaagaccgaggatctttatgcttccgga
gttgagggtttagttcgagctgttgaacgttttaaccctgaaaagagtcgtcgttttgag
gggtatgctttatttttaattaaagcagcaattatcgatgatttaaggaagcaggattgg
gtgccaagaagcgtacatcaaaaggcaaataagcttgctgatgctatggacgccctgcgt
ctgtcactcgggagagagcctacggatggtgatctttgtgagtatttccaaatttctcaa
caagagctttctggctggtttgcttcagctcggcccgcattaattatttctttaaacgag
gaaagaccctcgttatctgatggtgaatctggtgtagctctagaagaacgcattgctgat
gaaagagcagaaacaggatatgacattgttgataaaaaggaattctcttcattcttagca
agtgctatagagggccttgaagagaaagaaagaaaggtgatggctctatactactatgaa
gagcttgttcttaaggaaattggaaagattctaggagttagcgaatcacgagtatcccag
attcattccaaagccctgatcaagctccgagcggctttatctgcttttctttaa
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