Chlamydia psittaci RD1: Cpsi_8261
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Entry
Cpsi_8261 CDS
T02153
Name
(GenBank) putative primosomal replication factor
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chr
Chlamydia psittaci RD1
Pathway
chr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cpsi_8261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chr03400
]
Cpsi_8261
Enzymes [BR:
chr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cpsi_8261
DNA repair and recombination proteins [BR:
chr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpsi_8261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
ATPase_2
ADDB_N
CEP104_ZnF
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CBY17337
LinkDB
All DBs
Position
959289..961538
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AA seq
749 aa
AA seq
DB search
MGNIESTTFRLYAEVIVNSNINKVLDYGLPDHLEHITRGTGVSISLRGAKKYGIVHQIKT
HTECKRVLPVLGVIDSGIILPQDLLELMFWMSQYYFAPLGKTLRLVLPGISSSIIQPKQH
YRVLLKQSKAKTKEIILSIQKESPAQAATLKTLLSCSSPPGLSELMDKAKVSQSPIHSLE
KLGAIEIASAADLEIQEDRLTFFLPEAHVLHPQQQDAVDKISSSLSSGKFQTHLIFGVTG
SGKTEVYFQAIREARKLGKSAILLVPEIALTIQTVTLFKAHFGKEVGILHHKLNDSDRNK
TWREASNGNIHIIIGPRSALFCPLQNLGLIIVDEEHDPAYKQSESHPCYHARDVAVMRGK
LANATVVLGSATPSLESYAHALSGKYILSELSSRAAAAYPAKVSLIDMNMEREKTKTKTL
FSQAALKSIEKRLAVGEQVLVFFNRRGYHTNVSCSSCKHTLKCARCDMVLTFHKYANVLL
CHLCNSSPKDPQTSCPKCHGTMTLQYRGSGTEKIEKVLHSIFPQVRTIRIDSDTTKFKGS
HESLLKQFATGKADILIGTQMIAKGMHFPAVTLAIILNGDSGLYIPDFRASEQVFQLITQ
VTGRSGRSHLPGEVLIQSFLPDHSTIRCAIRQDYREFYHQEIPGRELCSYPPFVRLVRCI
FIGKCPNLTWKEAQRIHSILKEKLDTHTQLMQITPCGHFKIKDVFRYQFLIKSKQVLPVN
KKLHEALLTAKLSPKVKFMIDVDPTTTFF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatattgaatcaactacctttcgcctatacgcagaagtcatagtaaactccaat
atcaataaggtattagactacgggctccctgatcatctcgaacacattactaggggtact
ggtgttagcatttccttacggggagcaaaaaaatatggaatagtccatcagattaagaca
cacacagaatgtaaacgagttcttcctgttttaggtgttattgattctggaattatcctt
cctcaagatcttctagaacttatgttttggatgagtcaatattattttgcaccgttgggg
aagacactacgtttagtacttccgggaatatcttccagtattatacaacccaaacaacat
tatcgcgtcctactcaagcaaagcaaagcgaagacgaaagagatcattctttctattcaa
aaagaatctcctgcgcaagcagcaactttaaaaacattattatcatgtagctctcctcct
ggtctttcagaactcatggacaaggccaaggtgtcacaatctccgatccattctttagaa
aaacttggagctattgaaatagccagtgctgcagatcttgaaattcaagaagaccgtcta
acgttctttctccctgaagcccatgtgctacatccgcaacaacaagatgccgtggataag
atttcttcatccttatcttcggggaaatttcagacacacttgatttttggtgttacagga
agtggaaaaacagaagtatatttccaagctattcgtgaagcgaggaaattagggaaaagt
gcgattcttttggttcctgagattgctcttacaatacaaacagttaccctatttaaggcc
cattttggaaaagaagtgggtattctgcatcacaagcttaatgacagtgatagaaataaa
acctggagagaagcatcaaacgggaatattcatattattataggtccaagatcagcattg
ttttgtcctctacaaaatttaggactgatcatcgttgatgaagaacacgatcctgcctat
aaacaaagtgaaagccatccctgttatcatgctcgagatgttgctgtgatgcgagggaaa
ctggcaaatgctactgtagtgttaggcagtgctactccaagtctagaaagctacgcccat
gctttatcagggaagtatattctttcagaattatcatcacgagctgctgctgcctatcct
gcgaaggtttctcttatcgatatgaatatggaaagagaaaagacaaagacaaaaacatta
ttctctcaagctgcacttaaaagtattgaaaaacggctcgctgttggagaacaagtctta
gttttctttaatcgacgtggctaccatacgaatgtgtcctgttcttcatgtaaacatacg
ttgaaatgtgcccgctgcgatatggtattaactttccacaaatatgcgaatgtccttctc
tgtcatctctgtaattcttcccctaaagatcctcagacatcttgtccaaaatgtcatgga
actatgactttacaatatcgtggatcggggacagaaaaaatagaaaaagtattgcatagt
atcttcccacaagtgcgcactatccgtattgattcggacactacgaaatttaaaggaagt
catgaatctttattaaaacaatttgccacaggaaaagcggatatactcattgggacacaa
atgatagctaaagggatgcactttccagccgtaactttggccatcattttaaatggtgat
tctggtctgtacattcctgatttccgtgcctctgaacaagtatttcaattgatcacacaa
gtaacaggaaggtcgggaagaagccacctccctggagaggtcttaattcaatcgtttctt
cctgatcacagtaccattcgctgtgccatcagacaggattatcgagagttttaccaccaa
gaaatccctggcagggaattatgcagctacccgccatttgttcgtcttgtccgctgtata
ttcataggaaaatgccccaacctcacttggaaagaggcacaacgaatccactctatactt
aaagagaagttggatactcacacccaattaatgcaaatcacaccgtgtggacactttaaa
attaaagatgtatttcggtatcaatttttaataaaaagcaagcaagttttgcctgtaaat
aaaaagctccacgaagctttgctaactgcaaaactgtctcccaaagtaaaattcatgatt
gacgtcgatcctacaactacatttttctag
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