Chlamydia psittaci RD1: Cpsi_9741
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Entry
Cpsi_9741 CDS
T02153
Symbol
topA
Name
(GenBank) DNA topoisomerase I-fused to SWI domain
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chr
Chlamydia psittaci RD1
Brite
KEGG Orthology (KO) [BR:
chr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chr03032
]
Cpsi_9741 (topA)
03400 DNA repair and recombination proteins [BR:
chr03400
]
Cpsi_9741 (topA)
Enzymes [BR:
chr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cpsi_9741 (topA)
DNA replication proteins [BR:
chr03032
]
Prokaryotic type
DNA Topoisomerases
Cpsi_9741 (topA)
DNA repair and recombination proteins [BR:
chr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cpsi_9741 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
SWIB
Toprim
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-ProteinID:
CBY17480
LinkDB
All DBs
Position
1138655..1141243
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AA seq
862 aa
AA seq
DB search
MKKSLIVVESPAKIKTLQKLLGKGFIFASSLGHVVDLPAKEFGIDIEHDFEPDYQVLPDK
QEVISQICKLASSCDIVYLSPDPDREGEAIAWHIANQLPENTHIQRISFNAITKGAVNEA
LKHPREIDMALVNAQQARRLLDRIVGYKISPILSRKLQQRSGISAGRVQSVALKLVVDRE
KAIEAFVPTEYWNVRVFLQDPKTSKTFWAHLYSADGKKWEKELPKGKTEDEILLINSETQ
AQHYVDLLEDASYRVTRVEAKEKRRNAAPPFITSTLQQEASRHFRFSSSKTMSVAQTLYE
GVELDNEDATGLITYMRTDSVRIDPEALNNVRDYIHNTFGQEYLPKSPNVYTTKKMTQDA
HEAIRPTDIHLSPDKLEGKLSDDQLKLYSLIWKRFVASQMNPAIYDTLAMTISTNVKIDL
RASGSLLKFKGFLAVYEEKLDDDTTEEENLSLPQLHAQDVLDKEKVSAEQAFTKPLPRFT
EASLVKELEKSGIGRPSTYATIMNKIQSREYTIKENQRLRPTELGKIISQFLETNFPRIM
DIGFTALMEDELELIADNKKSWKLLLKEFWDQFLPVVTTAEKEAVIPRVITDIECSACHK
GKLVKIWAKNRYFYGCSEYPECDFKTSEEELAFNKDDYAVDTPWNSPCPVCGGEMKVRHG
RFGTFLGCFNYPQCRGTISIHKKGEEVEQEEAIPCPAIGCSGKILKKRSRYNKTFYSCSE
YPDCSVIGNTIDAVITKYTGTAKTPYEKKTTGKKKATTKSSSKTTKTTAKKKKSEGKTPK
TPKAGALLTPSPQLALMIGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII
GPEPVDMFQLPKLLNQHLFKSD
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatccttaatcgtagtggaatctcccgctaaaattaaaaccttgcaaaaactc
ttagggaaaggttttatttttgcttcctcactaggacatgttgttgaccttcccgccaag
gaatttggtatcgatatcgaacatgatttcgaacctgactatcaagttcttcctgataaa
caagaagttatcagtcaaatttgtaaattagcctccagttgtgatattgtctatctctct
cctgacccggaccgagaaggagaagcgattgcctggcatattgcaaatcagcttcctgaa
aatacgcatatccaaaggatatccttcaatgcaattaccaaaggtgctgttaatgaagct
ctaaagcatcctcgagaaatcgatatggctttagtaaatgctcaacaagctcgtcgcctg
ttagatcgtatcgttggttataaaatttctcctattttaagtcgtaagctacaacaaaga
tcgggtatatctgcaggacgcgtgcaatccgtagcactcaagcttgtcgttgatcgtgaa
aaagctatcgaagcctttgtacctaccgaatattggaatgtgcgtgttttcctccaagac
cctaaaacatctaagacattctgggcccacctatattctgctgacgggaaaaagtgggaa
aaagaactccctaaggggaaaaccgaagatgaaattttattaattaactctgaaactcaa
gctcaacattatgttgatctgttagaagacgcttcctatagagtgactcgcgtagaagcg
aaagaaaaacgacgtaatgccgcgccaccatttattacatccaccttgcaacaagaagca
agtcgtcatttcagattttcttcttctaaaacgatgtcagtagctcagacattatatgaa
ggtgtcgagttagataacgaagatgctacaggattaattacttatatgcgtacagattct
gtacgtattgatcctgaggcattaaataacgtcagagattatatacacaacacatttggg
caagaataccttccgaagtctcctaatgtctacacgacaaaaaagatgactcaagacgcc
catgaagctattcgccctacagacatccatttatctcccgataagcttgaagggaaactc
tccgatgatcaactcaagctttattctcttatttggaaacgttttgttgcttcccagatg
aatcctgcgatttatgatacattagcaatgacgatttcaacgaatgtaaaaatagatttg
cgtgcttctggatcattattgaaatttaaaggttttctcgcggtatacgaagaaaagctg
gatgatgatacaaccgaagaagaaaatctatcgcttcctcaactacacgcccaggacgtt
ttagataaggaaaaggtttcagcagaacaagcttttacaaaacccctaccgaggtttaca
gaagcttctttagtaaaagagttagaaaaatccggcattggccgcccctctacatacgca
acgattatgaataaaattcaaagtcgtgagtatactattaaggaaaatcagcggttacgc
cctacagaactcgggaaaattatctcgcaatttcttgagaccaactttcctcggattatg
gacataggttttacagctcttatggaagatgagctagagcttattgctgataataaaaag
tcttggaaattacttcttaaagaattttgggaccaatttcttcctgtagtcactactgca
gaaaaagaagctgttatccctcgcgtgataaccgatatcgaatgttccgcatgtcacaaa
ggaaaacttgttaaaatctgggcaaaaaatcgttatttttacggatgttcagaataccct
gagtgtgattttaaaacttctgaagaagaacttgctttcaacaaagacgattatgctgtt
gatacaccttggaatagcccctgccctgtttgcggtggggagatgaaagtccgccacgga
cgttttggaacatttttaggatgcttcaactatcctcaatgccgtggaacgatttccatt
cataagaaaggtgaggaagtagaacaagaagaagctattccttgtcctgccattggttgc
tcagggaaaattttaaagaaacgttctcgttacaataaaacattctattcttgctcagaa
tatcctgactgcagtgtgataggcaacactatagatgctgttattacaaagtacacagga
actgcaaaaacaccctacgaaaagaaaaccacagggaagaaaaaagccactacaaaatcc
agcagcaaaacgactaaaacaactgctaaaaaaaagaaaagcgaaggaaagactccaaaa
acccctaaagcaggagctttacttacaccatctcctcaactagctctgatgattggcccg
gaacctgtaggacgtggagaagccacaaagaaagtctggcaatacatcaaggaccataat
ctacaatcccctgagaataaaaagatgttgctgcccgacgagaagtttgaagcaattatt
ggcccggaacctgtagatatgttccaattgccaaaactactcaatcagcatttattcaaa
tctgattaa
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