Chryseobacterium sp.: F7R58_00600
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Entry
F7R58_00600 CDS
T09035
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
chra
Chryseobacterium sp.
Pathway
chra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7R58_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chra03021
]
F7R58_00600
03019 Messenger RNA biogenesis [BR:
chra03019
]
F7R58_00600
Transcription machinery [BR:
chra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
F7R58_00600
Messenger RNA biogenesis [BR:
chra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F7R58_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
S1CSD-TOTE-2
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QFG52128
UniProt:
A0A5P5ZLR5
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All DBs
Position
121199..123097
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AA seq
632 aa
AA seq
DB search
MFNLEILRSKSIAELTKIAKDLEVKLPRNSDENTIIFAILDFQASNSKTAKEYYKSTEKA
AASAEPESAPVQKAAPKTPKKPAAKKKPSAAKTEADPMPAMIEITETPVEEPDSEQKPAT
EEAPKEKPARQPRKKKEPVVPEPAVAAEEPTAETEQPKEEVSKPKTQKQEQSRPQKQQPQ
QNRPVQQQNQAQQSQNQGQQQPQTPPQQQQQGQNPQQNRNQSQNSGNQNENRPQGGNQHK
NQKHQRNQDNQEETEPKKEYSFDGMVTIEGVLEILPDNYGFLRSPDFSYISSPDDVYVST
AQIRNYGLKTGDAVKGIVRLPKEGEKYFSLMRPVEVNGRDLAFIKDRVSFEYLTPLFPEE
KFNLAGKGSTHSTRIVDLFSPIGKGQRAMIVAQPKTGKTMLLKDIANAISANHPEAYMMV
LLIDERPEEVTDMERSVNAEVIASTFDEAAEKHVKVANLVLAKAQRMVECGHDVVILLDS
ITRLARAYNTVTPASGKILSGGVDANALHKPKRFFGAARNIEGGGSLTIIATALIDTGSK
MDEVIFEEFKGTGNMELQLDRKIANKRIYPAIDLVASSTRKDDLLLDETTTQRMWILRKY
LSDMNPMEAMEFVNRNIKGTQSNEEFLMSMNK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacttagaaatactaaggtctaaatccattgcggaactgaccaaaattgctaag
gatttggaggtgaagctgcccagaaacagcgatgaaaataccattattttcgccatactg
gactttcaggcttccaactccaaaactgcaaaggagtattataaaagcacagagaaggct
gctgcatcagcagaacccgaaagtgcaccggtacagaaagccgcgcctaaaacgcccaaa
aaaccggcggcaaaaaagaaaccttccgctgccaaaactgaggccgatcccatgcctgcc
atgattgaaatcactgaaacgccagtggaagaacctgactcagagcagaaaccggctaca
gaagaagctcccaaagaaaagccggcaaggcagcccagaaagaaaaaagaacctgtagta
ccggaaccggcagtcgctgcggaagaaccaactgccgaaacagagcaacctaaagaagag
gtttcaaaacctaaaactcagaagcaggaacagagcagacctcaaaagcagcaaccacag
caaaacagacctgttcagcagcagaaccaggctcagcaatcccagaatcagggacagcag
cagccccagacacctccacaacaacagcagcagggtcagaatccacaacaaaaccgcaac
cagtctcagaacagcggaaaccagaatgagaaccgtcctcagggcggaaatcagcataaa
aatcaaaaacatcagcgcaaccaggataaccaggaagaaactgaaccgaaaaaggaatac
agcttcgacggtatggtaaccatagaaggtgtgctggaaatcctgccggataattacgga
ttcctccgttcaccggatttctcctatatctcctctcccgacgacgtttatgtatctacc
gctcagatccgcaattacggactgaagaccggcgacgctgtaaaagggattgtaaggctg
ccaaaggaaggagagaaatacttctccctgatgaggccggtagaagtaaacggccgcgac
ctggcgtttataaaagaccgcgtttcgtttgaatacctaacgccacttttccctgaagag
aagtttaatcttgcaggcaaaggttctacccattccacacgtatcgtcgatttattttcg
ccgatcggtaaaggtcagcgtgccatgattgtggcgcagcctaagacaggtaagaccatg
ttgcttaaggatattgcgaatgcgatctcagccaatcacccggaagcatatatgatggtc
cttcttattgacgaaagaccggaagaagttaccgatatggaaagaagcgtaaatgcggag
gttattgcctctacattcgacgaagctgcagaaaagcatgtaaaagtagccaaccttgtc
cttgcaaaggcacagcgcatggtagagtgcggtcacgatgtggtgatcctgctggattcc
attacccgtctggccagagcctataatacggtaacacctgcttcaggtaagatcctttcc
ggaggtgtagatgccaacgctctgcacaagccaaaacgtttcttcggagcggcacgtaat
attgaaggcggcggatcactgaccatcattgccacagcacttattgatacaggctccaaa
atggatgaggtaatctttgaagaatttaaaggtaccggaaatatggaacttcagcttgac
agaaagattgccaataaaagaatctatcctgccattgacctggttgcatccagcacgcgt
aaggacgacctgcttttggatgaaaccaccacacagcgtatgtggatcctgaggaaatat
ttatcagatatgaatccgatggaggcgatggaatttgtaaaccgcaacattaaaggaacc
caaagcaatgaagagttcctgatgagcatgaacaaataa
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